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  • TISSUE

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  • UQCC2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:84.6 nTPM
HPA Brain:52.2 nTPM
GTEx:84.6 nTPM
Pig:24.1 nTPM
Mouse:246.3 nTPM
Allen mouse:4.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 52.2
2226 Male, age 75, left hemisphere 59.5
1961 Female, age 42, unknown 44.8
Dorsomedial nucleus
nTPM: 42.3
1989 Male, age 62, unknown 45.8
2041 Female, age 72, unknown 45.4
2017 Female, age 42, unknown 35.8
Lateral hypothalamic area
nTPM: 45.0
2271 Male, age 75, both hemispheres 49.6
1791 Male, age 80, right hemisphere 48.5
2228 Male, age 66, unknown 44.7
2412 Male, age 62, unknown 37.2
Mammillary body
nTPM: 47.5
1923 Female, age 72, unknown 60.7
2413 Male, age 66, unknown 52.3
1945 Male, age 80, right hemisphere 45.6
1948 Female, age 72, unknown 41.2
1834 Female, age 42, unknown 37.5
Paraventricular nucleus
nTPM: 32.8
2700 Male, age 62, unknown 32.8
Preoptic area
nTPM: 42.6
1907 Male, age 80, right hemisphere 50.0
1861 Female, age 42, unknown 41.6
2414 Female, age 72, unknown 36.1
Supraoptic nucleus
nTPM: 49.9
1894 Female, age 72, unknown 56.6
2043 Male, age 62, unknown 47.4
2835 Female, age 72, unknown 45.7
Ventromedial nucleus
nTPM: 44.4
1982 Female, age 72, unknown 46.7
1822 Female, age 42, unknown 42.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 84.6
Samples: 257

Max nTPM: 209.5
Min nTPM: 37.8
Std nTPM: 22.6
Median nTPM: 80.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 209.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 192.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 191.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 175.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 159.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 138.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 130.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 130.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 129.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 128.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 120.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 120.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 116.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 116.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 115.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 114.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 114.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 113.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 113.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 113.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 112.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 111.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 109.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 109.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 108.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 107.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 106.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 106.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 105.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 104.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 104.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 104.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 103.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 103.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 103.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 103.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 103.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 102.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 102.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 102.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 102.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 101.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 100.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 100.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 100.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 99.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 99.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 99.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 99.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 99.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 99.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 99.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 98.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 98.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 98.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 98.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 98.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 97.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 97.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 97.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 97.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 97.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 97.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 97.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 96.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 95.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 94.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 93.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 93.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 93.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 92.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 92.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 92.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 92.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 92.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 91.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 91.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 91.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 90.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 90.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 90.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 90.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 89.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 89.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 89.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 89.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 88.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 88.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 88.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 87.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 87.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 87.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 87.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 87.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 86.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 86.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 86.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 86.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 86.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 86.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 86.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 86.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 86.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 85.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 85.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 84.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 84.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 84.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 84.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 84.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 83.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 83.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 83.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 83.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 83.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 83.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 82.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 82.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 82.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 82.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 82.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 82.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 81.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 81.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 81.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 81.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 81.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 80.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 80.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 80.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 80.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 80.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 80.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 80.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 80.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 79.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 79.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 79.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 79.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 79.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 79.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 79.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 79.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 78.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 78.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 78.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 78.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 78.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 78.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 78.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 78.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 78.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 78.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 77.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 77.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 77.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 76.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 76.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 76.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 76.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 76.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 76.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 76.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 76.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 76.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 75.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 75.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 75.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 75.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 75.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 75.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 75.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 75.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 75.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 75.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 74.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 74.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 74.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 74.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 73.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 73.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 72.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 72.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 72.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 72.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 72.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 72.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 72.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 72.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 72.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 72.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 72.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 72.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 71.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 71.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 71.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 71.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 70.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 70.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 70.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 70.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 70.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 69.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 69.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 69.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 69.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 69.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 69.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 69.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 68.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 68.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 67.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 65.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 65.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 65.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 64.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 64.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 64.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 64.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 64.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 64.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 63.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 62.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 62.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 61.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 61.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 61.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 60.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 60.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 60.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 60.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 60.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 59.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 58.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 58.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 58.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 58.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 57.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 57.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 55.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 54.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 53.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 53.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 52.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 51.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 49.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 47.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 46.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 44.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 42.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 40.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 37.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 24.1
Samples: 4

Max nTPM: 29.9
Min nTPM: 20.7
Sample A Female 29.9
Sample B Female 23.2
Sample C Male 22.6
Sample D Male 20.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 246.3
Samples: 4

Max nTPM: 295.9
Min nTPM: 206.2
Sample A Male 264.6
Sample B Male 295.9
Sample C Female 206.2
Sample D Female 218.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.4
68523348 Antisense, RP_050118_02_F01, Mouse strain C57BL/6J (56 days, male) 4.4

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