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FXYD6
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  • TISSUE

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  • FXYD6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:306.2 nTPM
HPA Brain:380.6 nTPM
GTEx:306.2 nTPM
Pig:204.0 nTPM
Mouse:242.3 nTPM
Allen mouse:12.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

380.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 375.0
2226 Male, age 75, left hemisphere 485.9
1961 Female, age 42, unknown 264.0
Dorsomedial nucleus
nTPM: 250.5
2041 Female, age 72, unknown 295.8
2017 Female, age 42, unknown 250.1
1989 Male, age 62, unknown 205.7
Lateral hypothalamic area
nTPM: 311.1
2228 Male, age 66, unknown 344.3
2412 Male, age 62, unknown 335.6
1791 Male, age 80, right hemisphere 282.4
2271 Male, age 75, both hemispheres 282.0
Mammillary body
nTPM: 65.1
2413 Male, age 66, unknown 79.4
1948 Female, age 72, unknown 76.8
1945 Male, age 80, right hemisphere 76.4
1834 Female, age 42, unknown 52.4
1923 Female, age 72, unknown 40.7
Paraventricular nucleus
nTPM: 380.6
2700 Male, age 62, unknown 380.6
Preoptic area
nTPM: 282.2
1907 Male, age 80, right hemisphere 403.4
1861 Female, age 42, unknown 233.4
2414 Female, age 72, unknown 209.9
Supraoptic nucleus
nTPM: 307.3
2043 Male, age 62, unknown 361.0
1894 Female, age 72, unknown 298.5
2835 Female, age 72, unknown 262.2
Ventromedial nucleus
nTPM: 275.4
1982 Female, age 72, unknown 282.7
1822 Female, age 42, unknown 268.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

306.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 306.2
Samples: 257

Max nTPM: 666.5
Min nTPM: 43.9
Std nTPM: 119.0
Median nTPM: 310.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 666.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 595.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 575.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 547.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 533.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 526.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 510.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 501.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 498.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 495.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 494.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 494.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 488.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 486.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 484.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 481.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 480.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 479.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 478.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 473.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 472.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 468.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 468.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 462.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 461.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 461.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 458.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 454.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 453.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 452.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 451.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 448.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 448.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 447.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 447.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 441.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 435.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 435.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 434.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 433.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 432.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 431.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 430.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 428.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 427.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 426.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 424.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 423.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 423.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 421.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 419.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 419.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 418.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 417.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 416.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 410.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 409.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 407.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 405.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 402.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 401.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 401.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 399.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 398.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 397.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 395.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 395.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 392.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 392.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 391.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 391.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 387.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 386.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 385.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 381.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 379.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 379.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 378.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 377.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 377.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 376.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 376.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 371.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 371.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 370.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 366.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 363.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 362.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 361.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 359.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 359.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 359.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 358.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 357.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 357.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 356.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 355.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 355.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 352.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 351.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 351.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 349.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 348.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 346.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 342.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 341.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 336.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 334.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 333.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 332.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 332.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 332.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 331.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 330.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 330.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 330.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 330.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 327.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 327.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 327.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 326.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 324.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 323.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 321.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 321.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 315.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 315.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 313.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 310.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 307.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 305.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 305.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 304.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 303.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 303.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 303.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 302.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 300.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 299.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 297.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 296.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 294.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 291.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 290.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 289.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 285.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 284.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 284.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 282.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 282.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 281.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 278.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 270.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 267.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 265.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 265.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 265.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 262.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 261.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 259.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 258.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 257.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 257.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 253.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 251.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 250.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 248.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 248.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 247.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 246.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 246.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 245.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 244.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 240.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 237.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 234.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 234.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 231.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 231.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 230.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 230.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 227.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 227.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 223.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 223.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 221.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 220.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 213.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 213.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 212.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 212.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 211.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 209.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 208.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 202.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 201.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 201.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 199.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 199.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 198.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 197.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 195.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 193.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 190.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 189.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 188.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 186.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 186.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 185.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 182.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 181.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 175.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 174.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 174.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 170.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 170.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 170.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 169.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 164.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 164.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 163.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 161.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 160.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 160.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 157.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 157.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 155.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 154.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 153.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 153.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 149.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 148.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 148.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 147.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 147.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 146.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 132.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 131.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 130.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 127.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 124.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 123.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 121.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 116.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 114.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 110.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 107.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 106.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 104.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 103.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 102.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 95.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 89.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 87.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 85.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 53.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 43.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

204.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 204.0
Samples: 4

Max nTPM: 228.3
Min nTPM: 185.0
Sample A Female 228.3
Sample B Female 185.0
Sample C Male 203.0
Sample D Male 199.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

242.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 242.3
Samples: 4

Max nTPM: 259.1
Min nTPM: 218.9
Sample A Male 241.7
Sample B Male 259.1
Sample C Female 249.4
Sample D Female 218.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 12.4
69113656 Antisense, RP_050316_02_E05, Mouse strain C57BL/6J (56 days, male) 14.5
73592534 Antisense, RP_051017_01_E10, Mouse strain C57BL/6J (56 days, male) 10.3

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