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  • TISSUE

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  • RAB1A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:116.4 nTPM
HPA Brain:91.4 nTPM
GTEx:116.4 nTPM
Pig:77.5 nTPM
Mouse:188.7 nTPM
Allen mouse:2.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 87.3
2226 Male, age 75, left hemisphere 103.1
1961 Female, age 42, unknown 71.5
Dorsomedial nucleus
nTPM: 79.4
2041 Female, age 72, unknown 92.2
1989 Male, age 62, unknown 83.0
2017 Female, age 42, unknown 63.1
Lateral hypothalamic area
nTPM: 91.4
1791 Male, age 80, right hemisphere 99.5
2271 Male, age 75, both hemispheres 96.3
2228 Male, age 66, unknown 94.5
2412 Male, age 62, unknown 75.4
Mammillary body
nTPM: 90.1
1923 Female, age 72, unknown 113.4
2413 Male, age 66, unknown 97.1
1948 Female, age 72, unknown 83.6
1945 Male, age 80, right hemisphere 79.4
1834 Female, age 42, unknown 77.2
Paraventricular nucleus
nTPM: 64.7
2700 Male, age 62, unknown 64.7
Preoptic area
nTPM: 80.9
1907 Male, age 80, right hemisphere 98.2
2414 Female, age 72, unknown 72.4
1861 Female, age 42, unknown 72.0
Supraoptic nucleus
nTPM: 84.4
1894 Female, age 72, unknown 98.6
2835 Female, age 72, unknown 77.9
2043 Male, age 62, unknown 76.6
Ventromedial nucleus
nTPM: 80.4
1982 Female, age 72, unknown 81.1
1822 Female, age 42, unknown 79.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 116.4
Samples: 257

Max nTPM: 192.7
Min nTPM: 55.4
Std nTPM: 24.4
Median nTPM: 117.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 192.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 184.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 178.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 176.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 172.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 166.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 166.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 163.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 161.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 160.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 158.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 157.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 157.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 156.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 155.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 154.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 153.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 151.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 150.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 148.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 148.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 145.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 145.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 145.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 145.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 144.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 144.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 143.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 143.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 143.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 143.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 143.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 142.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 142.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 142.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 141.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 141.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 141.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 141.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 140.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 139.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 139.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 139.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 139.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 138.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 138.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 138.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 138.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 138.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 136.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 136.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 136.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 135.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 135.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 135.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 135.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 135.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 134.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 134.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 134.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 133.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 133.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 133.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 132.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 131.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 131.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 131.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 131.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 130.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 129.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 129.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 129.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 129.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 129.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 129.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 128.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 128.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 128.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 128.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 128.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 128.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 128.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 128.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 128.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 128.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 127.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 127.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 127.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 127.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 126.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 125.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 125.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 125.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 125.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 125.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 125.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 125.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 124.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 124.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 124.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 123.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 123.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 122.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 122.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 122.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 122.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 122.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 121.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 121.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 121.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 121.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 121.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 120.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 120.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 120.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 120.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 120.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 120.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 119.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 119.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 119.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 119.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 118.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 118.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 117.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 117.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 117.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 117.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 117.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 117.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 116.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 116.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 116.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 115.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 115.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 115.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 115.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 114.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 114.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 114.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 113.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 113.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 113.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 113.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 113.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 112.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 112.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 112.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 112.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 111.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 111.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 110.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 110.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 110.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 110.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 109.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 109.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 109.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 109.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 108.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 108.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 108.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 108.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 108.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 108.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 108.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 107.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 106.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 106.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 106.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 106.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 105.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 105.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 105.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 105.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 104.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 104.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 104.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 103.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 103.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 103.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 103.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 102.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 102.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 102.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 102.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 102.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 101.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 101.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 100.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 100.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 100.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 100.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 99.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 99.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 99.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 99.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 98.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 98.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 97.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 97.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 97.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 96.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 95.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 95.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 95.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 94.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 94.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 94.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 93.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 93.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 93.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 93.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 93.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 93.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 92.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 92.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 92.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 92.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 91.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 91.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 91.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 90.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 90.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 90.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 89.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 88.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 88.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 88.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 87.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 86.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 85.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 85.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 83.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 82.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 82.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 81.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 81.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 81.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 81.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 80.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 78.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 76.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 75.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 75.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 73.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 71.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 67.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 64.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 64.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 64.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 63.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 63.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 60.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 60.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 57.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 55.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 77.5
Samples: 4

Max nTPM: 95.2
Min nTPM: 69.1
Sample A Female 95.2
Sample B Female 75.9
Sample C Male 69.8
Sample D Male 69.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 188.7
Samples: 4

Max nTPM: 202.5
Min nTPM: 176.9
Sample A Male 181.9
Sample B Male 202.5
Sample C Female 193.4
Sample D Female 176.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.3
68191486 Antisense, RP_041129_01_C07, Mouse strain C57BL/6J (56 days, male) 3.6
878 Antisense, RP_Baylor_102991, Mouse strain C57BL/6J (56 days, male) 1.0

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