RAP1GDS1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • RAP1GDS1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:74.5 nTPM
GTEx:41.9 nTPM
FANTOM5:79.4 Scaled Tags Per Million
Macaque:67.8 nTPM
Pig:122.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.5
Sample id Sample description nTPM
Putamen
nTPM: 74.5
2466 Female, age 79, unknown 98.0
1829 Male, age 74, unknown 87.4
1937 Female, age 91, right hemisphere 77.9
1838 Male, age 80, right hemisphere 75.0
2482 Female, age 94, left hemisphere 70.0
2647 Male, age 75, left hemisphere 58.5
2489 Female, age 72, unknown 54.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 41.9
Samples: 254

Max nTPM: 91.4
Min nTPM: 18.5
Std nTPM: 13.2
Median nTPM: 40.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 91.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 86.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 83.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 79.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 76.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 75.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 75.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 75.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 73.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 73.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 72.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 71.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 66.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 66.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 65.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 63.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 63.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 63.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 63.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 62.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 61.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 61.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 60.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 60.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 60.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 60.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 60.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 59.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 56.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 56.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 55.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 55.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 54.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 54.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 54.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 54.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 54.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 53.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 53.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 53.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 52.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 52.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 52.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 52.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 52.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 51.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 51.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 51.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 51.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 50.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 50.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 49.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 49.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 49.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 49.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 49.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 49.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 49.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 48.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 48.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 48.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 48.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 48.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 48.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 47.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 47.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 47.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 47.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 47.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 46.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 46.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 46.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 46.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 45.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 45.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 45.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 45.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 45.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 45.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 44.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 44.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 44.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 44.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 44.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 44.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 44.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 44.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 43.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 43.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 43.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 43.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 43.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 42.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 42.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 42.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 42.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 42.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 42.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 42.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 42.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 42.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 41.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 41.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 41.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 41.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 41.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 41.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 40.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 40.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 40.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 40.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 40.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 40.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 40.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 39.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 39.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 39.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 39.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 39.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 39.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 39.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 39.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 38.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 38.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 38.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 38.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 37.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 37.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 37.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 37.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 37.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 37.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 37.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 37.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 37.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 36.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 36.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 36.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 36.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 36.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 36.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 36.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 35.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 35.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 35.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 35.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 35.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 34.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 34.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 34.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 34.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 34.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 34.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 34.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 34.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 33.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 33.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 33.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 33.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 33.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 33.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 33.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 33.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 32.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 32.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 32.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 32.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 32.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 32.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 32.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 32.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 32.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 32.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 32.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 32.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 32.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 31.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 31.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 31.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 31.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 31.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 31.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 30.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 30.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 30.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 30.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 30.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 29.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 29.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 29.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 29.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 29.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 29.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 29.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 29.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 28.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 28.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 28.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 28.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 27.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 27.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 27.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 27.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 27.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 27.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 27.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 27.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 27.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 27.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 27.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 26.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 26.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 25.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 25.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 25.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 25.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 24.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 24.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 24.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 24.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 24.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 23.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 23.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 22.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 22.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 22.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 21.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 21.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 20.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 20.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 18.5
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

79.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 79.4
FF:10176-103C5 60 years, female 79.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.8
Macaque sample Sample description nTPM
Putamen
nTPM: 67.8
Samples: 2

Max nTPM: 73.4
Min nTPM: 62.1
Sample A 62.1
Sample B 73.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.8
Pig sample Sample description nTPM
Putamen
nTPM: 122.8
Samples: 3

Max nTPM: 168.0
Min nTPM: 95.9
Sample B Female 95.9
Sample C Male 168.0
Sample D Male 104.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.