HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:168.7 nTPM
HPA Brain:325.2 nTPM
GTEx:168.7 nTPM
FANTOM5:257.1 Scaled Tags Per Million
Pig:411.3 nTPM
Mouse:705.3 nTPM
Allen mouse:24.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051386
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 325.2
Sample id Sample description nTPM
Hippocampus
nTPM: 236.3
1898 Male, age 80, left hemisphere 321.4
2621 Female, age 67, right hemisphere 288.5
1855 Male, age 76, left hemisphere 212.1
1911 Female, age 85, right hemisphere 206.0
2148 Female, age 91, left hemisphere 204.4
2529 Female, age 94, left hemisphere 185.1
Dentate gyrus
nTPM: 251.0
1927 Female, age 91, both hemispheres 370.6
2531 Female, age 67, both hemispheres 262.2
2010 Male, age 76, both hemispheres 248.4
2530 Female, age 94, left hemisphere 233.9
2246 Female, age 85, both hemispheres 217.0
2528 Male, age 74, both hemispheres 174.1
Entorhinal gyrus
nTPM: 282.2
2613 Female, age 94, left hemisphere 353.5
2764 Male, age 80, right hemisphere 338.9
1938 Female, age 85, left hemisphere 322.7
1787 Male, age 76, left hemisphere 266.9
2686 Male, age 75, right hemisphere 221.2
2117 Female, age 91, right hemisphere 190.2
Hippocampus, CA1
nTPM: 276.6
2749 Male, age 80, left hemisphere 389.0
1873 Female, age 85, both hemispheres 290.2
2045 Male, age 76, both hemispheres 251.4
2082 Female, age 91, right hemisphere 238.1
2527 Male, age 74, both hemispheres 214.2
Hippocampus, CA2
nTPM: 238.6
1892 Male, age 76, both hemispheres 321.2
1963 Male, age 80, left hemisphere 260.8
1940 Female, age 85, left hemisphere 234.3
2249 Male, age 74, both hemispheres 221.8
2113 Female, age 91, right hemisphere 206.3
2437 Female, age 94, left hemisphere 187.2
Hippocampus, CA3
nTPM: 285.7
2620 Female, age 94, left hemisphere 402.1
2137 Male, age 80, left hemisphere 305.4
1867 Male, age 76, both hemispheres 300.8
2436 Male, age 74, both hemispheres 244.4
2861 Female, age 67, both hemispheres 237.5
1891 Female, age 85, both hemispheres 224.0
Parahippocampal cortex
nTPM: 265.4
1850 Male, age 80, both hemispheres 332.2
1933 Female, age 85, both hemispheres 323.5
1990 Female, age 91, right hemisphere 322.9
2245 Female, age 91, both hemispheres 318.3
2250 Female, age 67, right hemisphere 258.1
2622 Female, age 67, right hemisphere 236.8
2532 Female, age 72, left hemisphere 230.4
2693 Female, age 94, both hemispheres 220.0
2018 Male, age 76, both hemispheres 218.1
2692 Male, age 74, both hemispheres 193.8
Perirhinal gyrus
nTPM: 325.2
1847 Female, age 91, left hemisphere 490.1
1794 Male, age 80, right hemisphere 333.2
1841 Female, age 85, right hemisphere 314.1
2848 Male, age 76, right hemisphere 255.6
2521 Female, age 94, right hemisphere 233.2
Subiculum
nTPM: 223.3
1901 Male, age 80, both hemispheres 276.9
1977 Female, age 85, both hemispheres 272.9
2619 Male, age 74, both hemispheres 232.1
2042 Male, age 76, both hemispheres 200.6
2438 Female, age 94, left hemisphere 179.4
2729 Female, age 91, right hemisphere 177.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 168.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 168.7
Samples: 255

Max nTPM: 435.3
Min nTPM: 56.9
Std nTPM: 82.5
Median nTPM: 148.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 435.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 408.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 398.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 392.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 389.0
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 374.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 371.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 366.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 365.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 360.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 347.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 257.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 257.1
FF:10169-103B7 60 years, female 310.5
FF:10153-102I9 76 years, female 203.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 411.3
Pig sample Sample description nTPM
Subiculum
nTPM: 306.8
Samples: 4

Max nTPM: 436.3
Min nTPM: 236.7
Sample A Female 436.3
Sample B Female 280.7
Sample C Male 273.3
Sample D Male 236.7
Dorsal hippocampus
nTPM: 411.3
Samples: 4

Max nTPM: 577.9
Min nTPM: 308.9
Sample A Female 577.9
Sample B Female 388.6
Sample C Male 369.7
Sample D Male 308.9
Entorhinal cortex
nTPM: 324.2
Samples: 4

Max nTPM: 373.4
Min nTPM: 269.8
Sample A Female 366.3
Sample B Female 373.4
Sample C Male 269.8
Sample D Male 287.4
Ventral hippocampus
nTPM: 341.8
Samples: 4

Max nTPM: 402.6
Min nTPM: 223.0
Sample A Female 380.7
Sample B Female 223.0
Sample C Male 402.6
Sample D Male 360.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 705.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 705.3
Samples: 4

Max nTPM: 746.0
Min nTPM: 660.1
Sample A Male 660.1
Sample B Male 708.2
Sample C Female 706.7
Sample D Female 746.0
Hippocampal formation
nTPM: 687.3
Samples: 4

Max nTPM: 785.1
Min nTPM: 622.9
Sample A Male 785.1
Sample B Male 646.0
Sample C Female 695.2
Sample D Female 622.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 24.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.8
71608204 Antisense, RP_050927_01_A12, Mouse strain C57BL/6J (56 days, male) 28.5
654925 Antisense, RP_040922_01_A11, Mouse strain C57BL/6J (56 days, male) 21.1

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