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  • TISSUE

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  • RTN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:211.7 nTPM
HPA Brain:495.7 nTPM
GTEx:211.7 nTPM
Pig:227.7 nTPM
Mouse:869.9 nTPM
Allen mouse:27.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

495.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 495.7
2226 Male, age 75, left hemisphere 710.4
1961 Female, age 42, unknown 281.0
Dorsomedial nucleus
nTPM: 225.7
2041 Female, age 72, unknown 283.5
1989 Male, age 62, unknown 202.1
2017 Female, age 42, unknown 191.7
Lateral hypothalamic area
nTPM: 370.9
2228 Male, age 66, unknown 504.2
2271 Male, age 75, both hemispheres 434.8
1791 Male, age 80, right hemisphere 351.2
2412 Male, age 62, unknown 193.5
Mammillary body
nTPM: 156.8
1923 Female, age 72, unknown 228.6
1948 Female, age 72, unknown 163.2
1945 Male, age 80, right hemisphere 153.6
2413 Male, age 66, unknown 124.5
1834 Female, age 42, unknown 113.8
Paraventricular nucleus
nTPM: 227.6
2700 Male, age 62, unknown 227.6
Preoptic area
nTPM: 235.8
1907 Male, age 80, right hemisphere 359.6
1861 Female, age 42, unknown 184.0
2414 Female, age 72, unknown 163.8
Supraoptic nucleus
nTPM: 255.2
1894 Female, age 72, unknown 295.6
2043 Male, age 62, unknown 256.7
2835 Female, age 72, unknown 213.4
Ventromedial nucleus
nTPM: 309.7
1982 Female, age 72, unknown 367.2
1822 Female, age 42, unknown 252.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

211.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 211.7
Samples: 257

Max nTPM: 696.7
Min nTPM: 18.4
Std nTPM: 128.2
Median nTPM: 183.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 696.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 622.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 614.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 580.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 478.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 467.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 465.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 458.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 454.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 431.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 426.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 424.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 418.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 413.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 413.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 412.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 412.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 411.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 409.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 408.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 407.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 404.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 404.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 402.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 395.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 393.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 387.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 386.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 385.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 384.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 383.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 381.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 380.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 379.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 376.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 374.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 374.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 363.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 353.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 353.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 352.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 352.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 350.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 346.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 346.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 344.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 343.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 343.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 332.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 332.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 332.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 331.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 330.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 328.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 328.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 325.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 324.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 321.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 319.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 317.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 317.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 314.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 314.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 312.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 311.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 310.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 307.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 303.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 303.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 301.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 300.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 298.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 294.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 293.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 289.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 285.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 284.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 282.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 282.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 273.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 269.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 268.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 261.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 256.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 256.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 253.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 251.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 251.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 250.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 247.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 246.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 246.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 243.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 240.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 237.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 236.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 236.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 230.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 229.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 229.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 228.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 225.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 223.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 222.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 222.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 218.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 218.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 215.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 211.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 210.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 209.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 209.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 206.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 204.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 202.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 201.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 201.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 201.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 200.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 200.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 194.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 193.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 189.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 188.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 187.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 185.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 183.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 183.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 183.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 182.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 181.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 180.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 180.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 179.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 178.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 176.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 174.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 172.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 170.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 170.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 168.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 167.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 166.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 166.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 166.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 164.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 164.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 164.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 163.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 162.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 162.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 159.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 157.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 157.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 156.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 154.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 154.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 153.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 153.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 152.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 151.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 151.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 149.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 149.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 144.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 143.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 142.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 139.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 138.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 137.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 136.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 132.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 131.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 127.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 127.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 127.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 126.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 125.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 122.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 122.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 120.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 119.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 117.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 116.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 116.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 115.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 115.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 114.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 113.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 112.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 111.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 109.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 109.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 108.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 107.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 107.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 105.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 105.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 104.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 101.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 100.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 98.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 97.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 96.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 96.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 93.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 91.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 91.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 87.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 87.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 84.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 83.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 82.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 78.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 78.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 76.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 76.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 76.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 75.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 75.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 74.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 73.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 73.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 70.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 70.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 69.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 69.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 68.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 66.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 64.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 64.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 62.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 62.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 58.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 57.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 55.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 54.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 52.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 52.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 51.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 49.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 49.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 49.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 49.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 45.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 43.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 41.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 38.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 38.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 36.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 34.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 29.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 28.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 23.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 21.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 18.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

227.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 227.7
Samples: 4

Max nTPM: 294.9
Min nTPM: 199.1
Sample A Female 294.9
Sample B Female 205.4
Sample C Male 199.1
Sample D Male 211.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

869.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 870.0
Samples: 4

Max nTPM: 938.0
Min nTPM: 784.2
Sample A Male 936.2
Sample B Male 938.0
Sample C Female 821.4
Sample D Female 784.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

27.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 27.7
68193013 Antisense, RP_040928_01_C01, Mouse strain C57BL/6J (56 days, male) 29.0
70928293 Antisense, RP_050725_02_C08, Mouse strain C57BL/6J (56 days, male) 26.4

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