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  • NDUFB10
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:138.4 nTPM
HPA Brain:100.2 nTPM
GTEx:138.4 nTPM
FANTOM5:149.4 Scaled Tags Per Million
Pig:161.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 100.2
1981 Female, age 72, midline 122.3
2565 Male, age 75, midline 119.3
2194 Female, age 79, both hemispheres 90.8
2048 Male, age 55, midline 85.2
2816 Male, age 47, midline 83.4
Cervical spinal cord, dorsal horn
nTPM: 97.8
2173 Female, age 72, unknown 119.0
2069 Male, age 47, both hemispheres 102.3
2296 Male, age 66, both hemispheres 100.6
2721 Male, age 90, both hemispheres 94.1
2297 Male, age 75, both hemispheres 85.8
1877 Male, age 55, unknown 85.0
Cervical spinal cord, ventral horn
nTPM: 92.7
2098 Female, age 72, unknown 108.0
2068 Male, age 55, unknown 97.8
2480 Male, age 75, both hemispheres 95.6
2295 Male, age 66, both hemispheres 91.5
2809 Male, age 90, both hemispheres 91.1
2820 Female, age 79, both hemispheres 72.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.4
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 138.4
Samples: 204

Max nTPM: 239.8
Min nTPM: 80.0
Std nTPM: 25.8
Median nTPM: 134.5
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 239.8
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 221.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 208.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 207.3
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 197.3
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 196.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 195.6
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 193.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 189.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 183.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 180.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 180.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 179.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 178.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 177.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 177.2
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 176.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 171.9
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 171.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 171.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 170.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 170.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 170.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 170.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 169.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 168.8
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 168.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 167.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 166.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 166.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 164.0
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 163.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 163.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 163.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 162.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 160.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 159.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 159.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 158.6
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 158.6
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 156.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 156.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 156.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 156.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 155.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 155.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 155.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 155.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 154.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 154.1
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 153.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 153.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 153.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 153.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 152.8
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 151.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 150.6
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 149.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 149.6
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 149.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 149.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 149.0
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 148.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 148.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 147.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 147.7
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 147.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 147.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 146.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 146.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 146.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 146.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 146.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 145.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 144.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 144.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 144.2
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 143.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 143.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 143.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 143.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 142.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 142.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 142.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 142.6
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 142.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 142.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 141.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 140.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 140.5
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 140.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 139.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 139.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 139.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 138.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 138.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 137.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 137.4
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 136.8
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 135.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 135.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 134.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 134.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 134.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 133.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 133.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 133.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 132.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 132.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 132.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 131.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 131.8
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 131.4
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 131.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 131.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 130.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 130.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 129.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 129.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 129.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 129.2
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 129.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 129.0
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 129.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 128.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 127.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 127.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 127.0
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 126.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 126.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 126.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 126.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 125.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 124.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 124.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 124.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 124.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 123.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 123.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 123.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 122.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 122.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 122.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 122.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 122.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 122.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 122.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 121.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 121.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 121.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 121.7
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 121.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 121.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 121.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 121.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 121.1
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 120.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 120.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 120.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 119.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 119.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 119.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 119.0
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 118.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 117.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 115.8
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 115.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 115.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 115.4
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 114.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 114.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 113.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 113.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 113.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 112.2
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 112.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 112.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 111.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 110.6
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 110.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 109.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 109.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 109.4
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 108.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 108.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 107.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 107.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 107.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 106.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 106.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 105.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 103.2
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 102.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 102.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 101.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 99.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 98.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 95.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 95.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 94.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 93.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 93.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 84.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 80.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

149.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 149.4
FF:10181-103D1 60 years, female 186.1
FF:10159-103A6 76 years, female 112.8

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 144.0
Samples: 4

Max nTPM: 162.0
Min nTPM: 135.1
Sample A Female 135.1
Sample B Female 141.2
Sample C Male 162.0
Sample D Male 137.8
Ventral spinal cord
nTPM: 161.8
Samples: 4

Max nTPM: 185.5
Min nTPM: 136.1
Sample A Female 136.1
Sample B Female 175.0
Sample C Male 185.5
Sample D Male 150.4

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