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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • ARHGDIA
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:213.4 nTPM
GTEx:185.9 nTPM
FANTOM5:187.6 Scaled Tags Per Million
Pig:117.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.4
Sample id Sample description nTPM
Putamen
nTPM: 213.4
1838 Male, age 80, right hemisphere 241.0
2647 Male, age 75, left hemisphere 219.5
1829 Male, age 74, unknown 216.5
2489 Female, age 72, unknown 214.6
2466 Female, age 79, unknown 208.6
1937 Female, age 91, right hemisphere 206.5
2482 Female, age 94, left hemisphere 187.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

185.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 185.9
Samples: 254

Max nTPM: 345.6
Min nTPM: 85.2
Std nTPM: 41.8
Median nTPM: 182.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 345.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 325.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 299.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 290.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 282.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 281.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 280.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 280.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 278.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 278.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 273.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 269.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 265.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 261.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 259.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 253.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 249.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 248.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 248.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 247.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 242.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 242.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 240.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 238.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 238.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 236.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 236.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 236.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 234.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 232.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 232.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 231.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 231.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 231.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 230.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 229.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 229.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 228.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 228.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 227.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 225.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 225.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 224.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 222.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 220.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 220.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 220.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 219.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 218.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 218.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 218.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 217.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 217.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 216.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 216.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 216.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 216.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 216.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 215.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 214.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 214.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 213.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 213.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 212.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 211.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 209.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 209.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 208.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 208.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 207.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 207.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 207.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 207.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 206.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 206.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 205.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 205.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 205.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 204.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 204.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 202.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 202.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 201.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 200.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 200.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 200.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 200.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 200.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 196.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 196.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 196.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 196.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 195.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 195.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 195.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 195.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 195.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 194.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 194.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 194.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 193.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 193.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 193.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 193.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 193.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 192.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 192.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 192.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 192.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 191.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 189.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 188.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 188.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 188.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 187.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 187.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 186.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 186.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 186.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 186.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 186.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 186.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 185.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 185.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 184.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 183.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 182.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 182.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 182.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 182.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 181.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 181.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 180.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 179.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 179.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 179.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 179.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 178.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 177.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 176.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 176.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 175.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 175.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 175.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 174.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 173.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 173.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 172.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 172.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 172.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 171.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 170.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 170.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 170.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 169.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 169.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 169.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 169.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 168.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 168.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 167.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 167.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 166.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 166.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 165.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 165.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 164.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 164.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 164.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 163.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 162.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 162.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 162.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 161.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 161.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 161.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 161.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 161.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 161.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 160.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 160.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 160.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 160.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 159.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 159.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 158.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 157.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 157.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 157.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 157.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 155.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 155.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 154.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 154.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 153.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 153.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 153.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 153.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 153.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 152.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 151.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 151.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 150.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 150.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 150.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 150.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 149.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 148.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 147.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 147.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 146.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 146.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 145.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 145.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 144.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 143.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 143.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 143.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 142.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 141.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 141.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 141.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 139.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 139.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 138.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 137.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 137.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 137.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 135.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 133.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 131.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 131.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 131.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 131.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 130.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 130.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 130.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 129.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 127.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 126.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 125.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 125.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 125.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 124.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 121.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 121.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 120.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 119.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 116.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 115.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 111.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 106.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 94.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 85.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

187.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 187.6
FF:10176-103C5 60 years, female 187.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.7
Pig sample Sample description nTPM
Putamen
nTPM: 117.8
Samples: 3

Max nTPM: 137.5
Min nTPM: 92.8
Sample B Female 92.8
Sample C Male 123.0
Sample D Male 137.5

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