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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • APP
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:641.6 nTPM
GTEx:426.0 nTPM
FANTOM5:1372.7 Scaled Tags Per Million
Macaque:470.1 nTPM
Pig:568.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

641.6
Sample id Sample description nTPM
Putamen
nTPM: 641.6
1829 Male, age 74, unknown 738.1
2466 Female, age 79, unknown 714.3
1937 Female, age 91, right hemisphere 710.0
2482 Female, age 94, left hemisphere 658.6
1838 Male, age 80, right hemisphere 651.0
2647 Male, age 75, left hemisphere 521.3
2489 Female, age 72, unknown 497.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

426.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 426.0
Samples: 254

Max nTPM: 802.5
Min nTPM: 186.0
Std nTPM: 125.8
Median nTPM: 400.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 802.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 750.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 743.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 735.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 713.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 709.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 705.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 702.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 701.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 693.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 688.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 686.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 679.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 674.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 665.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 664.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 649.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 637.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 631.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 628.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 618.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 611.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 601.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 601.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 598.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 598.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 596.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 596.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 588.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 581.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 579.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 579.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 578.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 577.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 576.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 572.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 572.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 568.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 568.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 563.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 562.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 560.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 557.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 554.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 552.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 549.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 548.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 546.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 542.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 540.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 538.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 537.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 535.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 531.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 529.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 529.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 524.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 522.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 519.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 515.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 511.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 509.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 507.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 504.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 500.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 498.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 496.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 494.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 493.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 493.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 491.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 490.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 490.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 488.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 488.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 486.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 485.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 485.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 483.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 479.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 478.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 475.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 474.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 471.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 470.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 470.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 469.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 469.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 468.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 466.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 461.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 459.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 458.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 456.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 455.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 454.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 453.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 452.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 449.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 448.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 447.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 446.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 444.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 443.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 443.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 442.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 440.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 436.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 433.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 432.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 429.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 427.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 427.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 425.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 424.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 420.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 419.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 418.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 416.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 415.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 415.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 412.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 405.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 405.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 405.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 402.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 400.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 400.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 398.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 397.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 396.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 396.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 395.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 395.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 393.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 391.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 390.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 390.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 390.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 389.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 387.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 387.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 387.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 385.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 384.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 383.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 383.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 382.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 380.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 379.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 378.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 376.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 374.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 374.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 371.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 365.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 364.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 362.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 362.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 359.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 358.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 357.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 357.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 356.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 355.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 355.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 354.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 354.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 353.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 352.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 351.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 351.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 350.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 350.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 350.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 347.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 345.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 344.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 343.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 343.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 342.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 342.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 341.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 338.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 338.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 337.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 337.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 336.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 336.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 336.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 333.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 328.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 327.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 326.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 326.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 325.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 325.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 324.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 320.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 320.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 319.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 318.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 318.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 317.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 315.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 313.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 313.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 313.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 311.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 311.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 308.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 308.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 305.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 301.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 300.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 300.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 300.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 298.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 297.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 296.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 296.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 295.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 286.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 280.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 280.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 279.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 278.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 276.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 275.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 275.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 273.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 272.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 271.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 270.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 270.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 270.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 266.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 265.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 264.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 257.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 252.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 251.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 249.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 244.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 243.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 239.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 233.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 231.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 224.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 216.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 206.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 202.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 195.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 186.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1372.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1372.7
FF:10176-103C5 60 years, female 1372.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

470.1
Macaque sample Sample description nTPM
Putamen
nTPM: 470.0
Samples: 2

Max nTPM: 487.4
Min nTPM: 452.7
Sample A 452.7
Sample B 487.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

568.5
Pig sample Sample description nTPM
Putamen
nTPM: 568.5
Samples: 3

Max nTPM: 701.7
Min nTPM: 428.7
Sample B Female 428.7
Sample C Male 701.7
Sample D Male 575.2

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