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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
248.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 206.5
2666
Male, age 74, left hemisphere
278.3
1870
Female, age 42, unknown
262.4
2586
Male, age 75, left hemisphere
230.9
1833
Male, age 53, unknown
206.5
1830
Male, age 51, unknown
200.2
2828
Female, age 72, unknown
197.8
1827
Male, age 72, unknown
187.9
2219
Male, age 76, both hemispheres
181.2
2019
Male, age 18, unknown
175.7
2411
Female, age 72, unknown
144.4
Dorsal raphe nucleus nTPM: 195.0
2016
Female, age 72, unknown
222.3
1828
Male, age 53, unknown
203.3
2298
Female, age 72, unknown
193.6
2750
Male, age 76, both hemispheres
190.3
2047
Male, age 72, unknown
165.6
Inferior colliculus nTPM: 216.4
2849
Male, age 72, unknown
258.9
1890
Male, age 53, unknown
225.3
1848
Female, age 42, unknown
195.3
2097
Female, age 72, unknown
186.0
Median raphe nucleus nTPM: 226.2
2220
Male, age 76, midline
226.2
Periaquaductal grey, anterior nTPM: 196.8
2502
Female, age 75, unknown
233.1
1947
Male, age 18, unknown
179.4
1795
Male, age 51, unknown
177.8
Periaquaductal grey, dorsal nTPM: 202.3
2850
Male, age 76, both hemispheres
248.9
1831
Male, age 72, unknown
202.5
1840
Male, age 53, unknown
181.0
2464
Female, age 72, unknown
176.7
Periaquaductal grey, lateral nTPM: 190.3
2053
Male, age 18, unknown
220.4
2140
Male, age 76, both hemispheres
198.3
2272
Male, age 74, both hemispheres
152.2
Pretectal area nTPM: 187.2
2825
Male, age 18, unknown
212.2
1817
Female, age 42, unknown
208.0
1815
Male, age 53, unknown
204.4
2224
Female, age 72, unknown
195.1
1944
Female, age 72, unknown
189.7
1816
Male, age 51, unknown
189.3
2407
Male, age 75, both hemispheres
180.6
2316
Male, age 76, right hemisphere
180.5
2007
Male, age 72, unknown
177.4
2667
Female, age 75, unknown
167.9
2273
Male, age 74, both hemispheres
153.8
Red nucleus nTPM: 248.1
2503
Female, age 72, unknown
324.0
1865
Male, age 51, unknown
305.4
1821
Female, age 72, unknown
279.4
1904
Male, age 53, unknown
266.9
2725
Female, age 75, unknown
261.7
2588
Male, age 74, left hemisphere
237.9
2227
Male, age 72, unknown
224.8
2584
Male, age 75, left hemisphere
220.3
2769
Male, age 72, unknown
218.8
1954
Female, age 42, unknown
214.8
2785
Male, age 18, unknown
213.7
2823
Male, age 76, right hemisphere
209.1
Substantia nigra nTPM: 236.6
2699
Male, age 18, unknown
329.9
2665
Male, age 74, both hemispheres
279.6
2241
Male, age 72, unknown
270.5
2409
Female, age 72, unknown
258.3
1851
Male, age 51, unknown
253.1
1916
Female, age 42, unknown
217.5
1889
Female, age 72, unknown
211.6
2590
Female, age 75, unknown
200.2
1941
Male, age 53, unknown
188.2
2583
Male, age 75, right hemisphere
157.0
Superior colliculus nTPM: 214.9
2587
Male, age 74, left hemisphere
297.4
1913
Female, age 42, unknown
279.8
1995
Male, age 72, unknown
240.8
2668
Female, age 75, unknown
212.0
1796
Male, age 53, unknown
209.6
1895
Male, age 76, right hemisphere
203.4
2664
Male, age 75, both hemispheres
201.8
1839
Male, age 51, unknown
200.8
2261
Male, age 18, unknown
159.7
2087
Female, age 72, unknown
143.8
Ventral tegmental area nTPM: 223.3
2223
Female, age 72, unknown
265.1
1915
Female, age 42, unknown
239.3
2021
Male, age 53, unknown
227.4
2218
Male, age 76, both hemispheres
220.5
2410
Female, age 72, unknown
200.5
1942
Male, age 51, unknown
187.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
544.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 544.6
Samples: 183
Max nTPM: 1732.4
Min nTPM: 146.7
Std nTPM: 239.3
Median nTPM: 491.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
1732.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1338.6
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
1192.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1187.6
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
1154.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1120.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1094.0
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
1041.9
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
1021.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1008.0
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
999.6
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
992.8
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
981.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
947.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
918.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
908.9
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
876.3
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
871.9
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
856.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
847.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
815.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
797.1
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
796.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
794.9
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
782.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
767.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
761.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
748.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
746.7
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
743.2
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
736.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
732.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
726.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
718.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
700.2
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
693.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
686.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
684.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
684.5
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
679.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
679.3
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
664.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
661.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
660.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
653.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
649.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
647.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
647.0
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
643.7
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
641.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
639.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
631.1
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
629.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
625.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
624.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
621.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
618.5
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
617.7
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
617.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
611.7
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
605.9
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
604.8
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
603.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
598.1
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
597.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
596.4
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
586.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
583.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
580.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
576.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
576.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
571.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
571.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
567.6
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
564.4
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
563.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
556.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
553.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
541.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
540.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
540.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
537.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
530.1
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
524.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
518.3
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
517.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
500.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
499.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
494.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
493.9
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
492.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
491.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
488.4
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
487.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
486.5
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
474.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
468.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
464.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
463.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
462.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
461.4
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
452.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
451.8
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
449.6
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
447.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
446.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
446.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
443.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
441.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
437.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
434.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
433.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
432.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
431.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
428.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
427.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
427.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
423.5
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
420.5
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
420.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
418.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
417.3
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
411.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
410.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
409.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
408.5
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
403.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
398.9
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
398.8
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
396.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
395.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
395.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
394.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
391.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
385.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
384.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
383.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
379.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
370.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
370.1
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
365.3
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
360.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
358.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
357.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
355.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
354.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
354.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
351.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
346.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
346.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
338.0
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
329.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
329.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
328.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
325.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
324.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
323.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
322.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
320.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
318.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
314.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
306.3
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
302.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
302.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
298.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
294.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
293.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
293.1
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
290.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
283.2
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
278.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
278.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
277.0
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
266.7
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
265.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
263.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
256.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
240.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
232.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
213.7
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
173.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
150.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
146.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
631.9
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 631.9
Samples: 4
Max nTPM: 763.1
Min nTPM: 528.4
Sample A
Female
763.1
Sample B
Female
662.9
Sample C
Male
528.4
Sample D
Male
573.1
Midbrain nTPM: 621.0
Samples: 4
Max nTPM: 887.4
Min nTPM: 438.6
Sample A
Female
887.4
Sample B
Female
669.7
Sample C
Male
488.1
Sample D
Male
438.6
Periaqueductal gray nTPM: 511.5
Samples: 3
Max nTPM: 528.8
Min nTPM: 481.9
Sample B
Female
528.8
Sample C
Male
523.8
Sample D
Male
481.9
Superior colliculi nTPM: 611.2
Samples: 4
Max nTPM: 691.9
Min nTPM: 555.3
Sample A
Female
691.9
Sample B
Female
621.5
Sample C
Male
576.1
Sample D
Male
555.3
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
645.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 645.1
Samples: 4
Max nTPM: 706.1
Min nTPM: 560.6
Sample A
Male
706.1
Sample B
Male
636.7
Sample C
Female
560.6
Sample D
Female
676.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.