We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL11
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL11
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:637.0 nTPM
HPA Brain:316.9 nTPM
GTEx:637.0 nTPM
FANTOM5:127.4 Scaled Tags Per Million
Pig:826.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

316.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 254.4
1981 Female, age 72, midline 320.9
2565 Male, age 75, midline 306.1
2048 Male, age 55, midline 275.7
2816 Male, age 47, midline 188.3
2194 Female, age 79, both hemispheres 180.7
Cervical spinal cord, dorsal horn
nTPM: 259.5
2069 Male, age 47, both hemispheres 340.6
2173 Female, age 72, unknown 337.8
1877 Male, age 55, unknown 278.4
2296 Male, age 66, both hemispheres 269.9
2721 Male, age 90, both hemispheres 178.5
2297 Male, age 75, both hemispheres 151.6
Cervical spinal cord, ventral horn
nTPM: 316.9
2809 Male, age 90, both hemispheres 423.7
2480 Male, age 75, both hemispheres 384.2
2098 Female, age 72, unknown 371.8
2295 Male, age 66, both hemispheres 289.2
2068 Male, age 55, unknown 270.7
2820 Female, age 79, both hemispheres 161.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

637.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 637.0
Samples: 204

Max nTPM: 1768.7
Min nTPM: 223.5
Std nTPM: 234.1
Median nTPM: 606.5
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 1768.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1366.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 1302.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1267.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1185.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1179.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1173.8
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 1150.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1091.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1064.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 1061.9
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1057.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1048.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1038.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1020.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 1001.1
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 991.2
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 989.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 983.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 966.8
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 952.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 940.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 931.9
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 908.2
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 906.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 905.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 890.0
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 886.5
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 873.8
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 866.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 861.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 861.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 851.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 848.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 841.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 835.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 827.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 825.1
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 820.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 795.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 792.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 786.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 786.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 786.5
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 780.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 779.1
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 777.9
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 771.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 761.6
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 761.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 758.2
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 756.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 756.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 753.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 744.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 743.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 742.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 740.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 732.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 729.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 727.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 726.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 723.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 721.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 715.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 714.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 707.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 705.7
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 704.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 699.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 699.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 696.6
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 693.0
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 678.4
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 673.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 664.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 659.3
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 655.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 653.0
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 648.1
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 647.3
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 643.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 643.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 640.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 638.9
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 636.3
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 636.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 633.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 633.5
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 631.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 630.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 629.8
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 628.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 626.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 622.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 622.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 621.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 616.4
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 615.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 614.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 608.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 607.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 606.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 604.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 604.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 600.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 592.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 591.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 586.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 585.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 581.1
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 575.4
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 575.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 569.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 568.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 568.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 565.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 561.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 555.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 554.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 553.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 551.4
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 550.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 542.1
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 539.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 536.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 529.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 528.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 526.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 524.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 517.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 516.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 515.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 514.8
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 512.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 510.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 506.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 504.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 502.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 501.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 500.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 499.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 494.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 492.2
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 490.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 487.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 481.0
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 477.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 474.0
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 472.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 466.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 465.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 462.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 462.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 458.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 457.0
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 456.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 452.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 451.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 450.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 448.4
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 441.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 437.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 436.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 433.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 432.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 425.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 424.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 424.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 414.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 412.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 411.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 410.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 410.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 408.4
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 405.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 405.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 398.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 396.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 390.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 387.0
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 386.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 386.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 385.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 384.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 374.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 374.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 366.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 365.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 358.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 352.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 351.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 344.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 341.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 341.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 332.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 329.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 313.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 309.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 304.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 278.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 272.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 264.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 223.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

127.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 127.4
FF:10181-103D1 60 years, female 145.2
FF:10159-103A6 76 years, female 109.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

826.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 826.9
Samples: 4

Max nTPM: 1156.7
Min nTPM: 599.7
Sample A Female 599.7
Sample B Female 921.7
Sample C Male 1156.7
Sample D Male 629.3
Ventral spinal cord
nTPM: 725.0
Samples: 4

Max nTPM: 842.8
Min nTPM: 578.3
Sample A Female 578.3
Sample B Female 777.2
Sample C Male 842.8
Sample D Male 701.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo