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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
299.7
Sample id
Sample description
nTPM
Hippocampus nTPM: 299.7
1898
Male, age 80, left hemisphere
363.5
2529
Female, age 94, left hemisphere
309.7
2621
Female, age 67, right hemisphere
307.0
1855
Male, age 76, left hemisphere
287.4
1911
Female, age 85, right hemisphere
278.5
2148
Female, age 91, left hemisphere
252.1
Dentate gyrus nTPM: 295.7
2530
Female, age 94, left hemisphere
384.6
2010
Male, age 76, both hemispheres
327.9
1927
Female, age 91, both hemispheres
274.5
2531
Female, age 67, both hemispheres
271.1
2528
Male, age 74, both hemispheres
264.7
2246
Female, age 85, both hemispheres
251.7
Entorhinal gyrus nTPM: 294.2
2686
Male, age 75, right hemisphere
356.3
2117
Female, age 91, right hemisphere
310.6
1787
Male, age 76, left hemisphere
295.0
1938
Female, age 85, left hemisphere
289.0
2764
Male, age 80, right hemisphere
287.9
2613
Female, age 94, left hemisphere
226.7
Hippocampus, CA1 nTPM: 278.3
2045
Male, age 76, both hemispheres
307.5
2082
Female, age 91, right hemisphere
301.2
1873
Female, age 85, both hemispheres
292.8
2749
Male, age 80, left hemisphere
249.0
2527
Male, age 74, both hemispheres
240.9
Hippocampus, CA2 nTPM: 295.8
1963
Male, age 80, left hemisphere
333.3
1940
Female, age 85, left hemisphere
311.8
1892
Male, age 76, both hemispheres
305.6
2113
Female, age 91, right hemisphere
280.9
2249
Male, age 74, both hemispheres
277.0
2437
Female, age 94, left hemisphere
266.2
Hippocampus, CA3 nTPM: 257.1
1867
Male, age 76, both hemispheres
317.6
1891
Female, age 85, both hemispheres
305.1
2861
Female, age 67, both hemispheres
252.0
2436
Male, age 74, both hemispheres
244.6
2137
Male, age 80, left hemisphere
224.4
2620
Female, age 94, left hemisphere
199.2
Parahippocampal cortex nTPM: 257.9
2018
Male, age 76, both hemispheres
357.0
1850
Male, age 80, both hemispheres
284.0
2250
Female, age 67, right hemisphere
278.8
1933
Female, age 85, both hemispheres
277.6
1990
Female, age 91, right hemisphere
265.8
2532
Female, age 72, left hemisphere
244.2
2692
Male, age 74, both hemispheres
230.3
2245
Female, age 91, both hemispheres
228.5
2693
Female, age 94, both hemispheres
215.0
2622
Female, age 67, right hemisphere
198.1
Perirhinal gyrus nTPM: 280.8
1841
Female, age 85, right hemisphere
307.0
1847
Female, age 91, left hemisphere
303.8
1794
Male, age 80, right hemisphere
289.5
2848
Male, age 76, right hemisphere
271.4
2521
Female, age 94, right hemisphere
232.5
Subiculum nTPM: 285.3
2042
Male, age 76, both hemispheres
353.5
1977
Female, age 85, both hemispheres
310.3
2729
Female, age 91, right hemisphere
282.8
1901
Male, age 80, both hemispheres
278.0
2438
Female, age 94, left hemisphere
246.8
2619
Male, age 74, both hemispheres
240.3
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
873.3
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 873.3
Samples: 255
Max nTPM: 2540.0
Min nTPM: 393.5
Std nTPM: 291.9
Median nTPM: 811.1
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
2540.0
GTEX-ZAJG-0011-R1a-SM-GQ1CV
50-59 years, female
2158.4
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
2107.3
GTEX-14E6C-0011-R1a-SM-G8W86
40-49 years, male
1836.4
GTEX-1R9K4-0011-R1a-SM-F342F
60-69 years, male
1777.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
1644.2
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
1617.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
1546.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1508.6
GTEX-1N5O9-0011-R1b-SM-F3K4W
60-69 years, male
1507.2
GTEX-1LKK1-0011-R1b-SM-F2TAF
50-59 years, female
1504.4
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
1416.8
GTEX-1MCQQ-0011-R1a-SM-F341G
60-69 years, male
1384.1
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
1367.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1338.7
GTEX-11ZUS-0011-R1a-SM-GI4W7
30-39 years, male
1324.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
1315.7
GTEX-11TTK-0011-R1b-SM-GIN92
60-69 years, female
1313.1
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
1307.6
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1285.8
GTEX-1LVAO-0011-R1a-SM-F649O
60-69 years, male
1284.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1267.9
GTEX-1RNSC-0011-R1b-SM-F342D
60-69 years, male
1251.3
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
1240.1
GTEX-13PLJ-0011-R1a-SM-GJ3QF
60-69 years, female
1235.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1219.4
GTEX-1NV8Z-0011-R1b-SM-F647K
60-69 years, male
1203.8
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
1198.7
GTEX-1MJK2-0011-R1b-SM-F649H
50-59 years, male
1190.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1179.4
GTEX-1PPGY-0011-R1b-SM-G8LN3
60-69 years, male
1171.4
GTEX-1JJEA-0011-R1b-SM-F6495
60-69 years, male
1148.2
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
1146.9
GTEX-1KANB-0011-R1a-SM-F3K5M
50-59 years, male
1144.5
GTEX-11DYG-0011-R1a-SM-GI4X6
60-69 years, male
1144.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1139.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1136.9
GTEX-13PVQ-0011-R1b-SM-GJ3RQ
50-59 years, male
1131.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1122.3
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
1116.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1116.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1106.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1102.6
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
1100.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
1096.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1094.9
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
1092.9
GTEX-1I19N-0011-R1b-SM-GOR1A
70-79 years, male
1090.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
1082.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1077.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1077.1
GTEX-14DAQ-0011-R1a-SM-G8W85
60-69 years, female
1075.1
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
1067.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1062.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
1050.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
1046.9
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
1015.3
GTEX-11DXY-0011-R1b-SM-GI4VQ
60-69 years, male
1010.8
GTEX-1JN6P-0011-R1b-SM-G8LL3
60-69 years, male
1010.3
GTEX-1PWST-0011-R1b-SM-F2I38
70-79 years, male
1009.8
GTEX-1P4AB-0011-R1b-SM-F2TAV
50-59 years, male
1008.0
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
988.1
GTEX-117XS-0011-R1b-SM-GJ3PQ
60-69 years, male
983.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
982.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
974.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
973.3
GTEX-1JMQK-0011-R1a-SM-F6484
60-69 years, male
971.8
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
970.0
GTEX-1O9I2-0011-R1a-SM-F2TAW
50-59 years, male
967.0
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
964.4
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
962.1
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
961.3
GTEX-12WSA-0011-R1b-SM-GI4VI
60-69 years, male
959.7
GTEX-1F52S-0011-R1a-SM-9OSX9
60-69 years, female
959.5
GTEX-12ZZZ-0011-R1a-SM-GIN8I
60-69 years, male
957.5
GTEX-1RQED-0011-R1a-SM-F3K5W
60-69 years, male
941.0
GTEX-1LSVX-0011-R1a-SM-F3K5F
60-69 years, male
940.3
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
938.7
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
938.0
GTEX-1MA7X-0011-R1b-SM-F2TAB
60-69 years, male
934.3
GTEX-11OF3-0011-R1b-SM-H65ZT
60-69 years, male
931.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
929.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
926.4
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
923.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
917.3
GTEX-13VXU-0011-R1a-SM-GINAT
50-59 years, male
909.3
GTEX-1JJ6O-0011-R1b-SM-F2I2M
60-69 years, male
905.8
GTEX-1192X-0011-R1b-SM-GI4VU
50-59 years, male
901.4
GTEX-13SLX-0011-R1a-SM-H6Q8N
50-59 years, female
901.4
GTEX-14JFF-0011-R1b-SM-G8W88
60-69 years, male
900.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
898.8
GTEX-1LSNL-0011-R1a-SM-F3K51
50-59 years, male
898.2
GTEX-1JMQJ-0011-R1b-SM-F2T9P
50-59 years, male
894.1
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
892.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
889.7
GTEX-15DYW-0011-R1a-SM-H6Q6Q
60-69 years, female
881.0
GTEX-ZZPT-0011-R1b-SM-GNINL
50-59 years, male
879.4
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
874.4
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
874.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
871.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
870.0
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
868.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
867.8
GTEX-1JMLX-0011-R1b-SM-G9ERV
50-59 years, male
862.2
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
858.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
855.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
854.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
854.2
GTEX-1LVA9-0011-R1b-SM-F2TB5
50-59 years, male
849.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
846.3
GTEX-1R9PO-0011-R1b-SM-F2I2G
60-69 years, female
842.9
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
842.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
841.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
841.1
GTEX-1RQEC-0011-R1b-SM-F2I2E
60-69 years, male
840.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
836.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
834.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
831.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
829.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
828.4
GTEX-12696-0011-R1a-SM-GHWPW
60-69 years, male
828.3
GTEX-RU72-0011-R1A-SM-HAUZG
50-59 years, female
825.5
GTEX-1OJC4-0011-R1a-SM-F2TAZ
50-59 years, female
822.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
821.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
814.1
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
812.9
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
811.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
811.1
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
808.8
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
804.5
GTEX-11PRG-0011-R1b-SM-H7OHD
50-59 years, male
804.1
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
799.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
791.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
790.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
790.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
787.5
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
783.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
782.5
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
780.5
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
780.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
779.7
GTEX-1KD4Q-0011-R1a-SM-F3K4Z
40-49 years, male
779.3
GTEX-ZAK1-0011-R1a-SM-GRR1R
50-59 years, female
778.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
774.2
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
772.8
GTEX-11NV4-0011-R1a-SM-GINAK
60-69 years, male
767.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
767.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
766.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
759.4
GTEX-12126-0011-R1a-SM-GJ3Q8
20-29 years, male
757.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
757.1
GTEX-1JMPZ-0011-R1b-SM-F6497
30-39 years, male
749.9
GTEX-1PIIG-0011-R1a-SM-F649P
30-39 years, male
748.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
746.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
746.5
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
746.1
GTEX-1POEN-0011-R1b-SM-F3K3K
30-39 years, female
743.1
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
742.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
741.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
740.2
GTEX-1QMI2-0011-R1b-SM-F3K5Q
60-69 years, male
738.2
GTEX-1JMQL-0011-R1a-SM-F3K4U
50-59 years, female
737.5
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
734.1
GTEX-ZYFD-0011-R1b-SM-GRR1T
50-59 years, male
733.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
731.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
730.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
729.3
GTEX-1JMOU-0011-R1b-SM-F341B
60-69 years, female
726.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
723.8
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
717.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
717.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
715.6
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
715.0
GTEX-1LH75-0011-R1a-SM-F341Y
50-59 years, female
710.9
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
710.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
709.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
707.3
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
705.5
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
704.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
703.9
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
703.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
703.6
GTEX-1N2EE-0011-R1a-SM-F3K5K
60-69 years, male
700.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
698.0
GTEX-14BMV-0011-R1b-SM-G9ERL
50-59 years, male
697.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
695.9
GTEX-1KWVE-0011-R1a-SM-F649B
30-39 years, male
693.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
692.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
691.5
GTEX-12ZZY-0011-R1a-SM-GIN9E
60-69 years, male
690.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
689.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
687.0
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
685.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
685.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
680.1
GTEX-15EO6-0011-R1b-SM-H7OGP
50-59 years, male
679.8
GTEX-ZYY3-0011-R1b-SM-GPI92
60-69 years, female
679.1
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
665.1
GTEX-1QP6S-0011-R1b-SM-F3K59
40-49 years, male
664.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
664.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
663.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
662.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
659.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
653.0
GTEX-15RJE-0011-R1b-SM-H6Q7N
40-49 years, male
648.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
645.2
GTEX-11H98-0011-R1a-SM-GIN8O
50-59 years, male
644.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
644.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
644.1
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
643.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
639.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
639.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
634.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
633.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
633.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
631.4
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
631.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
625.4
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
620.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
616.5
GTEX-1N2EF-0011-R1a-SM-F2TAT
60-69 years, male
615.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
613.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
612.2
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
612.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
605.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
604.1
GTEX-1RDX4-0011-R1a-SM-F3K5H
50-59 years, female
602.1
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
600.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
600.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
596.8
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
596.8
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
596.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
593.3
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
588.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
583.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
580.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
579.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
574.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
572.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
572.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
568.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
560.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
556.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
544.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
531.4
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
527.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
517.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
502.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
500.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
493.4
GTEX-15SHU-0011-R1b-SM-H6Q7U
40-49 years, female
470.9
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
468.2
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
462.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
427.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
393.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
278.8
Pig sample
Sample description
nTPM
Subiculum nTPM: 237.1
Samples: 4
Max nTPM: 326.2
Min nTPM: 196.8
Sample A
Female
326.2
Sample B
Female
225.1
Sample C
Male
196.8
Sample D
Male
200.3
Dorsal hippocampus nTPM: 278.9
Samples: 4
Max nTPM: 364.9
Min nTPM: 176.9
Sample A
Female
364.9
Sample B
Female
254.1
Sample C
Male
319.5
Sample D
Male
176.9
Entorhinal cortex nTPM: 237.1
Samples: 4
Max nTPM: 308.8
Min nTPM: 174.3
Sample A
Female
191.6
Sample B
Female
308.8
Sample C
Male
273.7
Sample D
Male
174.3
Ventral hippocampus nTPM: 241.7
Samples: 4
Max nTPM: 295.8
Min nTPM: 203.4
Sample A
Female
246.6
Sample B
Female
203.4
Sample C
Male
295.8
Sample D
Male
221.1
HIPPOCAMPAL FORMATION - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
351.2
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 344.4
Samples: 4
Max nTPM: 364.5
Min nTPM: 303.5
Sample A
Male
353.8
Sample B
Male
355.8
Sample C
Female
364.5
Sample D
Female
303.5
Hippocampal formation nTPM: 351.2
Samples: 4
Max nTPM: 393.2
Min nTPM: 321.3
Sample A
Male
393.2
Sample B
Male
332.1
Sample C
Female
321.3
Sample D
Female
358.3
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.