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TISSUE VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Vagina
Tissue proteome
Vagina
Tissue methods
VAGINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2401.9 nTPM
GTEx:2401.9 nTPM
FANTOM5:6.4 Scaled Tags Per Million

VAGINA - Annotated protein expression
Pending normal tissue analysis

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2401.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2401.9
Samples: 170

Max nTPM: 6242.4
Min nTPM: 1130.3
Std nTPM: 733.1
Median nTPM: 2252.1
GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 6242.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 5824.2
GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 4796.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 4157.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 4101.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 3976.3
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 3731.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3655.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 3622.7
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 3607.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 3596.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3563.5
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 3460.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3431.3
GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 3415.1
GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 3342.5
GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 3271.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 3199.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 3101.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 3077.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 3014.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 3009.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2997.7
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2987.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 2978.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2947.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2943.0
GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 2932.6
GTEX-RNOR-2526-SM-F21KT 50-59 years, female 2929.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2926.9
GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 2910.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2907.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2891.8
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 2882.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2862.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 2859.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2857.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2846.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2814.1
GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 2807.8
GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 2796.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2775.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 2757.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2754.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2749.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2738.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2695.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2676.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2668.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2665.9
GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 2665.7
GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 2649.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2648.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2563.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 2543.6
GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 2542.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 2541.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2540.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2532.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2517.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2516.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2505.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2483.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 2482.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 2474.1
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 2464.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 2459.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2458.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2455.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 2447.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 2446.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 2417.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 2391.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2377.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 2367.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2366.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2361.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2334.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2323.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2320.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 2313.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2308.7
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 2278.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 2275.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2266.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2237.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2237.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 2228.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2226.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2213.3
GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 2213.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2203.9
GTEX-S4UY-1026-SM-4AD53 40-49 years, female 2198.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 2190.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2187.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2185.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2169.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 2168.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2166.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 2164.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2156.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 2131.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 2131.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2121.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 2113.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 2107.5
GTEX-14A5I-2726-SM-5MR84 50-59 years, female 2104.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 2096.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 2091.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 2084.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2068.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2058.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 2026.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 2025.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 2021.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2015.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 2007.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 2003.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 2002.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2001.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1980.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 1975.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1974.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1960.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1928.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1915.2
GTEX-147F3-1526-SM-5MR7L 50-59 years, female 1912.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1908.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1906.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1900.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1879.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1867.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1850.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1849.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1831.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1826.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1811.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1807.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1801.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1778.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1777.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1776.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1773.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1748.7
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1732.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1717.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1708.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1703.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1672.4
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1671.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1665.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1658.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1638.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1627.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1606.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1584.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1584.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1577.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1569.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1562.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1542.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1522.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1517.3
GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 1502.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1479.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1468.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1462.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1462.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1455.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1130.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 6.4
FF:10204-103F6 68 years, female 6.4

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