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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1169.4
nTPM
FANTOM5:
2205.8
Scaled Tags Per Million
Pig:
711.9
nTPM
Allen mouse:
19.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1169.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 610.2
2188
Female, age 91, both hemispheres
693.7
2301
Female, age 85, both hemispheres
687.0
1984
Male, age 76, both hemispheres
578.6
2090
Male, age 80, both hemispheres
481.6
Dorsal cochlear nucleus nTPM: 498.0
2187
Female, age 91, both hemispheres
603.1
2802
Male, age 74, right hemisphere
518.3
2058
Male, age 76, both hemispheres
481.3
2378
Male, age 80, both hemispheres
469.1
2370
Male, age 61, both hemispheres
418.3
Dorsal tegmental nucleus nTPM: 473.3
2326
Male, age 74, both hemispheres
580.0
2083
Male, age 80, both hemispheres
545.1
1936
Male, age 76, left hemisphere
426.3
2358
Male, age 61, both hemispheres
341.5
Dorsolateral tegmental area nTPM: 473.2
2751
Female, age 85, both hemispheres
683.1
2654
Male, age 80, both hemispheres
558.7
2360
Male, age 74, both hemispheres
479.9
2141
Male, age 76, both hemispheres
435.6
2337
Male, age 61, both hemispheres
208.5
Kolliker-Fuse nucleus nTPM: 565.5
2793
Female, age 91, left hemisphere
682.4
2163
Male, age 80, both hemispheres
611.2
2315
Male, age 76, right hemisphere
402.8
Lateral lemniscal nuclei nTPM: 958.2
2453
Male, age 74, right hemisphere
1081.9
2169
Male, age 76, both hemispheres
1070.7
2036
Male, age 80, both hemispheres
1049.4
2746
Female, age 85, left hemisphere
874.1
2320
Female, age 91, left hemisphere
715.1
Lateral parabrachial nucleus nTPM: 630.5
2139
Female, age 85, right hemisphere
941.0
2013
Male, age 80, both hemispheres
678.6
2790
Male, age 61, both hemispheres
513.5
2792
Male, age 76, both hemispheres
388.8
Lateral vestibular nucleus nTPM: 521.5
2184
Male, age 76, both hemispheres
559.1
2311
Male, age 80, both hemispheres
483.9
Locus coeruleus nTPM: 866.6
2720
Male, age 74, both hemispheres
1137.0
2123
Female, age 91, both hemispheres
1068.9
2014
Male, age 55, unknown
1066.7
2317
Female, age 72, unknown
853.5
2788
Male, age 74, unknown
744.7
2162
Male, age 80, both hemispheres
608.1
1980
Male, age 76, both hemispheres
587.2
Medial parabrachial nucleus nTPM: 586.4
2854
Male, age 80, both hemispheres
760.2
2170
Female, age 91, both hemispheres
673.1
2463
Female, age 85, right hemisphere
566.2
2156
Male, age 61, both hemispheres
480.7
2786
Male, age 76, both hemispheres
452.1
Medial periolivary nuclei nTPM: 948.1
2171
Female, age 85, both hemispheres
1393.4
2063
Male, age 76, both hemispheres
1136.6
2791
Male, age 74, right hemisphere
981.3
2081
Male, age 80, both hemispheres
618.1
2458
Female, age 91, both hemispheres
611.2
Motor facial nucleus nTPM: 903.0
2062
Male, age 76, both hemispheres
1194.6
2365
Male, age 74, right hemisphere
1153.6
2327
Male, age 80, both hemispheres
916.2
2697
Female, age 85, both hemispheres
840.5
2126
Male, age 61, both hemispheres
768.4
2795
Female, age 91, both hemispheres
544.9
Motor trigeminal nucleus nTPM: 647.4
2560
Male, age 74, both hemispheres
862.1
2079
Male, age 80, both hemispheres
836.2
2321
Female, age 91, both hemispheres
589.4
2335
Male, age 61, both hemispheres
492.8
2309
Male, age 76, both hemispheres
456.6
Nuclei of the trapezoid body nTPM: 1113.0
2159
Male, age 61, both hemispheres
1715.9
2735
Female, age 85, both hemispheres
1344.7
1983
Male, age 76, both hemispheres
1067.9
2166
Male, age 80, both hemispheres
771.2
2368
Female, age 91, both hemispheres
665.2
Nucleus raphe magnus nTPM: 1169.4
2160
Male, age 61, both hemispheres
1867.6
2172
Female, age 85, both hemispheres
1402.0
2455
Male, age 74, both hemispheres
1287.0
2328
Male, age 80, both hemispheres
883.7
2051
Male, age 76, both hemispheres
817.0
2459
Female, age 91, both hemispheres
758.9
Paramedian reticular nucleus nTPM: 833.9
2050
Female, age 85, both hemispheres
1233.3
2313
Male, age 61, both hemispheres
816.4
2057
Male, age 80, both hemispheres
723.7
2052
Male, age 76, both hemispheres
562.2
Pedunculopontine tegmental nucleus nTPM: 536.2
2334
Male, age 80, both hemispheres
571.0
1921
Female, age 85, both hemispheres
545.3
2338
Male, age 61, both hemispheres
492.5
Pontine nuclei nTPM: 1125.3
2727
Male, age 61, right hemisphere
1769.8
2454
Male, age 74, left hemisphere
1302.9
1863
Male, age 55, unknown
1284.3
2787
Female, age 85, both hemispheres
1232.3
2109
Female, age 72, unknown
1167.8
1968
Male, age 76, left hemisphere
924.7
2319
Female, age 91, both hemispheres
717.9
2115
Male, age 80, left hemisphere
602.4
Pontine raphe nucleus nTPM: 746.8
2122
Female, age 85, midline
1005.2
2853
Male, age 76, midline
488.3
Posteroventral cochlear nucleus nTPM: 568.5
2752
Female, age 85, both hemispheres
819.5
2070
Male, age 76, both hemispheres
619.3
2341
Male, age 80, both hemispheres
501.6
2135
Female, age 91, both hemispheres
476.7
2371
Male, age 61, both hemispheres
425.4
Principal sensory trigeminal nucleus nTPM: 933.0
2158
Male, age 61, both hemispheres
1466.1
2008
Male, age 80, left hemisphere
1048.9
2367
Female, age 91, left hemisphere
725.3
2324
Male, age 76, both hemispheres
491.6
Reticular pontine nucleus, caudal nTPM: 814.2
2332
Male, age 80, right hemisphere
938.8
2092
Male, age 76, both hemispheres
819.0
2559
Male, age 74, both hemispheres
750.0
2457
Female, age 91, both hemispheres
748.8
Reticular pontine nucleus, oral nTPM: 851.8
2361
Male, age 74, both hemispheres
1457.9
2012
Female, age 85, both hemispheres
969.2
2366
Female, age 91, both hemispheres
668.0
1939
Male, age 80, both hemispheres
627.8
2167
Male, age 76, both hemispheres
536.1
Reticulotegmental nucleus nTPM: 674.9
2325
Male, age 76, both hemispheres
723.2
2452
Male, age 74, both hemispheres
714.4
2333
Male, age 80, both hemispheres
638.0
2322
Female, age 91, both hemispheres
624.2
Spinal trigeminal nucleus, oral nTPM: 573.1
2737
Female, age 85, both hemispheres
678.3
2164
Male, age 80, both hemispheres
628.2
1978
Male, age 76, both hemispheres
412.6
Subcoeruleus area nTPM: 630.2
1958
Male, age 80, both hemispheres
760.4
2089
Male, age 76, left hemisphere
719.4
2323
Female, age 91, left hemisphere
622.3
2369
Female, age 85, left hemisphere
596.8
2451
Male, age 74, both hemispheres
452.2
Superior olive nTPM: 950.1
1875
Female, age 85, both hemispheres
1280.2
2364
Male, age 74, right hemisphere
1175.5
2020
Male, age 76, both hemispheres
835.8
2329
Male, age 80, right hemisphere
806.2
2561
Female, age 91, both hemispheres
653.0
Ventral periolivary nuclei nTPM: 932.8
2130
Female, age 85, both hemispheres
1177.2
2165
Male, age 80, both hemispheres
1075.4
2023
Male, age 76, both hemispheres
813.0
2794
Female, age 91, left hemisphere
665.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 775.3
2449
Male, age 74, both hemispheres
1211.8
2840
Female, age 85, both hemispheres
850.5
1959
Male, age 76, both hemispheres
793.3
2161
Male, age 80, both hemispheres
740.2
2456
Female, age 91, both hemispheres
562.6
2359
Male, age 61, both hemispheres
493.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
711.9
Pig sample
Sample description
nTPM
Pons nTPM: 711.9
Samples: 4
Max nTPM: 858.1
Min nTPM: 518.4
Sample A
Female
837.2
Sample B
Female
518.4
Sample C
Male
634.0
Sample D
Male
858.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.