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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PFDN2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:53.2 nTPM
GTEx:159.4 nTPM
FANTOM5:88.0 Scaled Tags Per Million
Macaque:33.1 nTPM
Pig:22.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.2
Sample id Sample description nTPM
Putamen
nTPM: 53.2
1829 Male, age 74, unknown 58.4
2482 Female, age 94, left hemisphere 54.8
1838 Male, age 80, right hemisphere 54.1
1937 Female, age 91, right hemisphere 53.8
2466 Female, age 79, unknown 51.2
2647 Male, age 75, left hemisphere 50.8
2489 Female, age 72, unknown 49.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 159.4
Samples: 254

Max nTPM: 349.1
Min nTPM: 69.3
Std nTPM: 37.9
Median nTPM: 156.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 349.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 307.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 285.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 256.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 255.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 253.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 252.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 244.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 240.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 235.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 224.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 222.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 220.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 220.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 219.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 216.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 212.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 212.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 212.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 211.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 210.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 210.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 207.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 203.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 203.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 202.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 201.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 201.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 200.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 200.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 200.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 199.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 197.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 197.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 197.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 195.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 195.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 195.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 194.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 194.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 193.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 192.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 192.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 189.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 188.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 187.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 187.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 187.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 187.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 185.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 184.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 184.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 183.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 183.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 181.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 181.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 181.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 179.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 179.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 179.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 178.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 178.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 178.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 178.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 178.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 177.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 176.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 176.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 175.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 175.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 175.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 174.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 174.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 174.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 174.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 174.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 174.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 173.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 173.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 173.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 172.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 172.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 172.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 172.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 172.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 171.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 171.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 171.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 170.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 170.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 170.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 170.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 169.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 168.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 168.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 167.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 167.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 166.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 166.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 166.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 165.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 164.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 164.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 164.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 163.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 163.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 162.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 162.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 162.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 161.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 161.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 160.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 160.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 160.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 160.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 160.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 159.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 159.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 158.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 158.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 158.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 158.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 157.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 157.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 157.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 157.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 157.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 156.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 156.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 155.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 155.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 155.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 155.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 155.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 154.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 154.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 153.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 153.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 153.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 153.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 152.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 152.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 151.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 151.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 151.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 151.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 151.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 150.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 150.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 148.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 148.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 148.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 148.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 147.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 146.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 146.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 145.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 145.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 145.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 144.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 144.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 144.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 144.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 143.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 143.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 143.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 143.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 143.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 142.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 141.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 141.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 141.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 140.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 140.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 140.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 139.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 139.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 139.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 139.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 139.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 139.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 138.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 138.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 138.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 137.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 137.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 137.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 137.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 136.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 136.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 135.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 135.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 135.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 134.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 133.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 131.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 131.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 130.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 130.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 130.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 130.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 130.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 129.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 128.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 128.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 127.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 127.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 126.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 125.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 125.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 125.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 125.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 125.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 124.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 124.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 124.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 123.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 123.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 123.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 122.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 122.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 121.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 121.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 120.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 118.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 118.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 118.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 117.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 117.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 116.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 115.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 114.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 113.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 112.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 112.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 111.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 110.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 110.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 109.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 106.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 106.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 104.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 99.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 97.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 94.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 93.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 92.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 91.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 91.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 90.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 88.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 86.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 82.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 69.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

88.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 88.0
FF:10176-103C5 60 years, female 88.0

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.1
Macaque sample Sample description nTPM
Putamen
nTPM: 33.1
Samples: 2

Max nTPM: 37.3
Min nTPM: 28.9
Sample A 28.9
Sample B 37.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.1
Pig sample Sample description nTPM
Putamen
nTPM: 22.1
Samples: 3

Max nTPM: 24.3
Min nTPM: 20.8
Sample B Female 20.8
Sample C Male 24.3
Sample D Male 21.1

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