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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • HDGF
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:60.1 nTPM
GTEx:83.5 nTPM
FANTOM5:46.3 Scaled Tags Per Million
Macaque:71.3 nTPM
Pig:94.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.1
Sample id Sample description nTPM
Putamen
nTPM: 60.1
1829 Male, age 74, unknown 67.8
2647 Male, age 75, left hemisphere 66.5
2489 Female, age 72, unknown 64.0
2482 Female, age 94, left hemisphere 60.7
2466 Female, age 79, unknown 58.3
1838 Male, age 80, right hemisphere 53.8
1937 Female, age 91, right hemisphere 49.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 83.5
Samples: 254

Max nTPM: 155.4
Min nTPM: 50.8
Std nTPM: 16.2
Median nTPM: 79.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 155.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 127.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 126.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 125.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 124.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 121.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 121.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 119.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 119.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 116.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 114.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 114.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 113.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 113.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 112.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 112.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 112.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 112.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 111.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 111.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 110.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 110.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 109.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 109.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 108.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 108.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 107.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 107.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 106.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 106.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 105.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 104.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 103.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 102.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 101.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 101.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 101.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 100.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 100.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 100.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 100.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 100.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 100.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 100.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 100.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 100.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 97.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 97.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 97.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 96.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 96.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 96.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 96.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 95.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 95.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 95.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 94.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 94.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 94.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 93.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 92.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 92.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 92.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 92.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 92.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 92.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 92.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 91.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 91.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 91.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 90.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 90.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 90.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 89.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 89.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 89.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 89.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 89.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 88.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 88.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 88.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 88.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 87.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 87.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 87.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 87.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 86.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 86.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 86.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 86.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 86.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 86.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 85.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 85.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 85.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 85.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 84.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 84.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 84.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 84.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 84.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 84.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 83.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 83.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 83.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 83.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 83.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 83.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 83.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 82.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 82.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 82.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 82.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 81.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 81.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 80.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 80.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 80.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 80.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 80.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 80.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 80.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 79.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 79.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 79.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 79.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 79.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 79.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 78.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 78.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 78.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 78.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 78.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 77.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 77.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 77.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 77.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 77.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 77.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 77.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 76.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 76.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 76.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 76.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 76.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 76.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 76.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 76.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 76.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 76.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 76.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 75.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 75.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 75.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 75.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 75.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 75.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 75.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 75.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 74.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 74.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 74.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 74.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 74.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 74.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 73.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 73.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 73.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 73.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 73.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 73.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 73.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 73.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 73.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 73.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 73.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 73.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 73.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 73.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 72.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 72.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 72.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 72.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 72.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 72.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 72.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 72.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 72.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 72.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 72.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 71.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 71.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 71.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 71.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 70.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 70.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 70.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 70.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 70.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 70.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 70.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 70.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 70.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 69.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 69.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 69.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 69.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 69.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 69.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 68.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 68.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 68.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 68.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 68.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 68.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 67.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 67.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 67.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 67.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 67.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 67.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 66.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 66.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 66.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 66.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 66.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 66.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 66.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 65.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 65.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 65.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 65.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 64.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 64.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 64.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 64.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 64.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 64.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 63.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 63.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 63.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 62.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 62.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 61.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 61.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 61.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 60.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 59.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 59.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 54.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 50.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

46.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 46.3
FF:10176-103C5 60 years, female 46.3

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.3
Macaque sample Sample description nTPM
Putamen
nTPM: 71.3
Samples: 2

Max nTPM: 75.9
Min nTPM: 66.6
Sample A 66.6
Sample B 75.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.8
Pig sample Sample description nTPM
Putamen
nTPM: 94.7
Samples: 3

Max nTPM: 109.5
Min nTPM: 76.0
Sample B Female 76.0
Sample C Male 98.7
Sample D Male 109.5

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