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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • HAX1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:47.7 nTPM
GTEx:84.7 nTPM
FANTOM5:106.2 Scaled Tags Per Million
Macaque:53.8 nTPM
Pig:22.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.7
Sample id Sample description nTPM
Putamen
nTPM: 47.7
1838 Male, age 80, right hemisphere 57.0
2466 Female, age 79, unknown 54.6
2482 Female, age 94, left hemisphere 53.6
1937 Female, age 91, right hemisphere 53.0
2647 Male, age 75, left hemisphere 40.4
1829 Male, age 74, unknown 40.1
2489 Female, age 72, unknown 35.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 84.7
Samples: 254

Max nTPM: 159.8
Min nTPM: 50.2
Std nTPM: 18.4
Median nTPM: 81.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 159.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 140.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 140.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 138.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 138.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 134.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 130.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 129.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 127.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 125.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 123.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 122.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 121.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 119.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 117.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 116.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 116.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 116.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 115.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 115.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 110.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 109.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 109.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 108.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 106.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 106.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 105.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 105.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 105.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 105.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 104.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 103.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 103.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 103.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 102.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 102.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 102.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 102.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 101.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 101.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 101.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 100.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 100.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 100.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 99.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 99.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 99.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 99.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 99.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 99.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 98.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 98.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 97.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 97.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 97.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 97.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 97.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 96.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 95.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 95.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 95.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 95.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 95.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 94.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 94.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 94.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 94.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 94.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 94.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 93.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 93.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 92.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 92.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 92.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 92.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 92.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 91.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 90.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 90.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 90.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 90.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 90.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 90.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 90.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 90.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 90.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 89.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 89.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 89.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 89.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 89.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 88.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 88.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 88.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 87.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 87.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 87.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 87.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 87.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 87.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 87.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 86.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 86.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 86.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 86.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 86.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 86.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 85.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 85.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 84.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 84.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 84.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 84.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 84.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 84.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 83.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 83.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 83.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 82.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 82.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 82.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 82.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 82.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 82.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 81.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 81.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 81.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 81.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 80.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 80.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 80.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 80.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 80.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 80.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 80.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 80.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 79.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 79.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 79.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 79.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 79.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 78.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 78.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 78.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 78.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 78.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 78.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 77.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 77.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 77.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 77.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 77.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 77.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 77.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 77.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 76.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 76.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 76.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 76.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 76.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 76.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 75.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 75.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 75.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 75.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 75.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 74.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 74.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 74.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 74.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 74.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 74.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 74.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 74.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 74.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 73.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 73.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 73.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 73.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 73.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 73.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 73.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 73.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 73.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 73.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 73.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 72.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 72.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 72.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 72.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 71.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 71.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 71.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 70.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 70.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 70.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 70.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 70.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 69.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 69.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 69.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 68.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 68.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 68.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 67.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 66.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 66.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 66.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 66.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 66.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 66.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 65.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 65.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 65.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 65.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 65.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 63.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 63.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 63.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 63.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 63.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 63.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 62.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 62.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 62.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 62.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 62.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 61.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 61.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 59.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 59.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 59.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 59.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 58.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 57.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 57.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 57.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 57.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 56.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 56.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 54.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 51.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 51.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 50.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 50.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 106.2
FF:10176-103C5 60 years, female 106.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.8
Macaque sample Sample description nTPM
Putamen
nTPM: 53.8
Samples: 2

Max nTPM: 62.8
Min nTPM: 44.8
Sample A 44.8
Sample B 62.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.3
Pig sample Sample description nTPM
Putamen
nTPM: 22.3
Samples: 3

Max nTPM: 24.1
Min nTPM: 19.5
Sample B Female 19.5
Sample C Male 24.1
Sample D Male 23.4

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