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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
557.6
nTPM
Monaco:
970.0
nTPM
Schmiedel:
388.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
557.6
HPA sample
nTPM
gdT-cell nTPM: 479.1
Samples: 6
Max nTPM: 684.6
Min nTPM: 342.8
P10809_1007
342.8
P10809_1022
590.9
P10809_1041
684.6
P10809_1060
376.3
P10809_1077
414.7
P10809_1098
465.3
MAIT T-cell nTPM: 557.6
Samples: 6
Max nTPM: 750.2
Min nTPM: 451.8
P10809_1006
451.8
P10809_1024
598.0
P10809_1043
750.2
P10809_1062
515.7
P10809_1083
475.6
P10809_1097
554.4
Memory CD4 T-cell nTPM: 386.1
Samples: 6
Max nTPM: 470.3
Min nTPM: 299.1
P10809_1014
299.1
P10809_1026
395.0
P10809_1045
470.3
P10809_1064
342.4
P10809_1086
375.0
P10809_1113
434.6
Memory CD8 T-cell nTPM: 428.7
Samples: 5
Max nTPM: 531.9
Min nTPM: 357.1
P10809_1012
367.0
P10809_1027
458.1
P10809_1046
531.9
P10809_1065
357.1
P10809_1111
429.6
Naive CD4 T-cell nTPM: 295.3
Samples: 6
Max nTPM: 325.5
Min nTPM: 215.5
P10809_1015
215.5
P10809_1030
317.6
P10809_1049
308.0
P10809_1068
287.0
P10809_1085
318.1
P10809_1112
325.5
Naive CD8 T-cell nTPM: 321.0
Samples: 6
Max nTPM: 386.1
Min nTPM: 222.7
P10809_1016
222.7
P10809_1031
363.5
P10809_1050
359.6
P10809_1069
386.1
P10809_1087
331.2
P10809_1110
262.8
T-reg nTPM: 485.4
Samples: 6
Max nTPM: 645.1
Min nTPM: 380.8
P10809_1018
380.8
P10809_1037
453.9
P10809_1056
645.1
P10809_1075
418.4
P10809_1094
554.9
P10809_1106
459.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
970.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 590.7
Samples: 4
Max nTPM: 684.7
Min nTPM: 431.1
RHH5202_R3573
684.7
RHH5230_R3602
681.0
RHH5259_R3631
431.1
RHH5288_R3660
566.0
Effector memory CD8 T-cell nTPM: 850.1
Samples: 4
Max nTPM: 929.4
Min nTPM: 760.0
RHH5203_R3574
929.4
RHH5231_R3603
798.6
RHH5260_R3632
760.0
RHH5289_R3661
912.3
MAIT T-cell nTPM: 970.0
Samples: 4
Max nTPM: 1112.6
Min nTPM: 822.4
RHH5233_R3605
966.6
RHH5205_R3576
1112.6
RHH5262_R3634
978.5
RHH5297_R3663
822.4
Memory CD4 T-cell TFH nTPM: 596.1
Samples: 4
Max nTPM: 645.1
Min nTPM: 544.5
RHH5300_R3666
554.7
RHH5236_R3608
640.0
RHH5265_R3637
544.5
RHH5208_R3579
645.1
Memory CD4 T-cell Th1 nTPM: 560.1
Samples: 4
Max nTPM: 619.9
Min nTPM: 444.2
RHH5210_R3581
577.3
RHH5302_R3668
619.9
RHH5238_R3610
444.2
RHH5267_R3639
598.9
Memory CD4 T-cell Th1/Th17 nTPM: 733.8
Samples: 4
Max nTPM: 896.0
Min nTPM: 503.4
RHH5303_R3669
843.2
RHH5211_R3582
896.0
RHH5239_R3611
503.4
RHH5268_R3640
692.6
Memory CD4 T-cell Th17 nTPM: 718.0
Samples: 4
Max nTPM: 780.8
Min nTPM: 641.1
RHH5304_R3670
780.8
RHH5212_R3583
747.2
RHH5240_R3612
702.7
RHH5269_R3641
641.1
Memory CD4 T-cell Th2 nTPM: 766.0
Samples: 4
Max nTPM: 882.0
Min nTPM: 699.1
RHH5305_R3671
699.1
RHH5213_R3584
882.0
RHH5241_R3613
749.8
RHH5270_R3642
733.0
Naive CD4 T-cell nTPM: 469.1
Samples: 4
Max nTPM: 530.4
Min nTPM: 401.5
RHH5306_R3672
460.5
RHH5214_R3585
530.4
RHH5242_R3614
401.5
RHH5271_R3643
484.0
Naive CD8 T-cell nTPM: 455.4
Samples: 4
Max nTPM: 592.8
Min nTPM: 325.3
RHH5201_R3572
592.8
RHH5229_R3601
325.3
RHH5258_R3630
458.7
RHH5287_R3659
444.6
Non-Vd2 gdTCR nTPM: 819.4
Samples: 4
Max nTPM: 906.3
Min nTPM: 719.2
RHH5235_R3607
854.2
RHH5264_R3636
798.0
RHH5207_R3578
906.3
RHH5299_R3665
719.2
T-reg nTPM: 634.6
Samples: 4
Max nTPM: 712.5
Min nTPM: 560.2
RHH5301_R3667
594.5
RHH5237_R3609
712.5
RHH5266_R3638
560.2
RHH5209_R3580
671.0
Terminal effector memory CD4 T-cell nTPM: 756.0
Samples: 2
Max nTPM: 796.7
Min nTPM: 715.2
RHH5243_R3615
796.7
RHH5272_R3644
715.2
Terminal effector memory CD8 T-cell nTPM: 765.1
Samples: 4
Max nTPM: 795.4
Min nTPM: 721.8
RHH5232_R3604
771.9
RHH5204_R3575
721.8
RHH5261_R3633
771.2
RHH5296_R3662
795.4
Vd2 gdTCR nTPM: 793.8
Samples: 4
Max nTPM: 926.5
Min nTPM: 659.9
RHH5234_R3606
807.2
RHH5206_R3577
926.5
RHH5263_R3635
781.4
RHH5298_R3664
659.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.