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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • GUK1
EVOLUTIONARY AMYGDALA Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:463.7 nTPM
HPA Brain:132.7 nTPM
GTEx:463.7 nTPM
FANTOM5:338.0 Scaled Tags Per Million
Macaque:60.8 nTPM
Mouse:107.9 nTPM
Rat:109.7 nTPM
Pig:86.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.7
Sample id Sample description nTPM
Basal amygdala
nTPM: 128.1
2243 Female, age 91, right hemisphere 145.8
2827 Female, age 67, right hemisphere 142.4
2609 Male, age 75, right hemisphere 134.6
2110 Male, age 80, left hemisphere 133.2
2685 Female, age 94, left hemisphere 119.3
1955 Male, age 76, both hemispheres 93.1
Central amygdala
nTPM: 118.9
2826 Female, age 94, left hemisphere 177.8
2515 Male, age 75, right hemisphere 133.8
2239 Male, age 80, left hemisphere 107.8
1905 Male, age 76, both hemispheres 96.7
2701 Female, age 91, right hemisphere 78.1
Corticomedial amygdala
nTPM: 122.4
2535 Female, age 67, right hemisphere 149.2
2829 Male, age 80, left hemisphere 138.1
2429 Female, age 94, left hemisphere 132.6
2428 Male, age 75, right hemisphere 128.2
2242 Female, age 91, right hemisphere 113.5
2240 Male, age 76, both hemispheres 72.7
Lateral amygdala
nTPM: 132.7
2830 Female, age 67, right hemisphere 177.9
2534 Female, age 94, left hemisphere 171.1
2516 Male, age 75, right hemisphere 148.7
2255 Female, age 91, right hemisphere 108.2
1883 Male, age 76, both hemispheres 96.7
2256 Male, age 80, left hemisphere 93.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

463.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 463.7
Samples: 181

Max nTPM: 1898.4
Min nTPM: 163.0
Std nTPM: 197.9
Median nTPM: 436.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 1898.4
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 1080.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1044.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1016.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 934.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 919.3
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 846.4
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 788.1
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 783.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 767.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 765.0
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 763.2
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 728.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 709.7
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 689.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 680.2
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 675.5
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 675.2
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 670.3
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 668.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 667.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 645.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 631.9
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 626.9
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 624.5
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 620.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 604.8
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 601.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 598.6
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 586.6
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 586.4
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 585.4
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 583.6
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 582.0
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 579.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 578.8
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 576.7
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 575.4
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 574.1
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 573.8
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 570.8
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 569.0
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 563.0
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 552.4
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 549.3
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 547.9
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 542.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 541.6
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 538.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 535.2
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 519.3
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 517.3
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 513.0
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 512.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 509.8
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 507.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 507.0
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 506.9
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 505.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 505.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 504.8
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 503.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 503.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 501.7
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 501.0
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 498.9
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 497.5
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 491.2
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 490.7
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 489.4
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 487.8
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 486.0
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 485.0
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 484.6
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 484.0
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 482.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 478.6
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 476.5
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 472.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 470.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 468.8
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 467.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 463.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 463.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 461.3
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 460.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 459.2
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 451.9
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 442.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 439.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 436.7
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 436.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 423.1
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 423.0
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 421.3
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 421.3
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 420.9
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 417.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 416.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 415.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 410.3
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 408.3
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 408.3
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 404.6
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 395.2
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 392.1
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 390.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 386.1
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 383.9
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 381.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 380.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 378.5
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 377.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 376.4
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 376.1
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 375.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 373.8
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 373.8
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 373.0
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 366.6
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 365.1
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 364.8
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 360.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 358.2
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 354.5
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 350.3
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 350.0
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 348.9
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 346.4
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 346.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 344.5
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 342.5
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 341.3
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 338.1
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 337.1
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 335.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 326.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 324.3
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 320.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 319.3
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 318.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 313.7
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 312.5
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 310.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 310.3
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 308.1
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 305.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 305.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 304.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 300.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 300.6
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 299.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 297.9
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 297.7
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 294.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 293.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 291.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 287.0
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 281.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 281.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 269.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 269.1
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 267.2
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 265.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 264.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 262.6
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 261.1
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 256.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 256.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 253.0
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 250.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 245.5
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 237.1
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 235.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 229.4
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 217.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 213.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 207.8
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 206.9
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 181.5
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 163.0
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

338.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 338.0
FF:10151-102I7 76 years, female 338.0

AMYGDALA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.8
Macaque sample Sample description nTPM
Amygdala
nTPM: 60.9
Samples: 2

Max nTPM: 64.2
Min nTPM: 57.5
Sample A 57.5
Sample B 64.2

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.2
Pig sample Sample description nTPM
Amygdala
nTPM: 86.2
Samples: 4

Max nTPM: 118.7
Min nTPM: 67.6
Sample A Female 118.7
Sample B Female 78.2
Sample C Male 80.3
Sample D Male 67.6

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 107.9
Samples: 4

Max nTPM: 115.8
Min nTPM: 101.7
Sample A 101.7
Sample B 115.8
Sample C 109.1
Sample D 104.9

AMYGDALA - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.7
Rat sample Sample description nTPM
Amygdala
nTPM: 109.7
Samples: 4

Max nTPM: 122.0
Min nTPM: 93.6
Sample A 116.7
Sample A 122.0
Sample A 106.6
Sample A 93.6

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