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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:728.9 nTPM
GTEx:1078.8 nTPM
FANTOM5:1607.1 Scaled Tags Per Million
Macaque:1.7 nTPM
Pig:1767.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

728.9
Sample id Sample description nTPM
Putamen
nTPM: 728.9
2466 Female, age 79, unknown 936.5
1829 Male, age 74, unknown 892.5
1937 Female, age 91, right hemisphere 800.2
1838 Male, age 80, right hemisphere 797.1
2482 Female, age 94, left hemisphere 746.6
2647 Male, age 75, left hemisphere 501.8
2489 Female, age 72, unknown 427.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1078.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1078.8
Samples: 254

Max nTPM: 2760.6
Min nTPM: 229.2
Std nTPM: 350.2
Median nTPM: 1038.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2760.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2231.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1998.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1959.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1861.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1839.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1815.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1786.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1781.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1781.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1772.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1757.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1742.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1712.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1691.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1688.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1616.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1605.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1596.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1569.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1564.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1560.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1540.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1537.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1520.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1510.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1509.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1500.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1488.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1483.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 1471.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1459.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1455.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1454.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1442.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1437.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1427.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1427.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1424.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1413.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1411.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1397.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1380.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1369.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1368.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1361.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1357.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 1356.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1348.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1347.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1332.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1321.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1316.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1309.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1306.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1304.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1302.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1302.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1300.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1294.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1291.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1288.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1281.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1279.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1278.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1274.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1272.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1269.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1264.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1261.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1252.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1245.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1243.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 1232.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1230.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1226.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1224.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1223.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1222.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1219.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1211.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1210.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1208.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1206.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1199.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1199.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1196.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1193.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1183.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1168.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1161.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1160.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1153.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1151.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 1150.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1149.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1147.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1143.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1138.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1137.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1134.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1129.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1127.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1121.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1118.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1116.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1114.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1103.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1102.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1099.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1097.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1096.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1094.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1093.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1085.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1083.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1083.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1078.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1078.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1059.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1057.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1054.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1048.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1047.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1047.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1046.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1041.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1034.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1033.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1030.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1029.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1026.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1024.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1022.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1022.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 1016.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1016.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 1013.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1013.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1005.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 996.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 995.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 993.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 988.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 988.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 984.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 976.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 974.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 972.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 964.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 958.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 957.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 957.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 952.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 948.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 947.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 941.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 938.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 935.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 927.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 925.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 924.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 922.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 919.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 915.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 915.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 915.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 911.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 908.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 900.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 898.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 897.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 896.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 895.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 895.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 894.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 888.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 880.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 878.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 877.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 876.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 876.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 872.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 866.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 866.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 863.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 859.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 858.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 856.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 852.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 850.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 850.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 849.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 845.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 844.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 840.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 836.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 835.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 832.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 832.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 831.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 829.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 828.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 817.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 815.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 814.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 812.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 811.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 808.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 808.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 800.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 800.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 798.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 777.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 773.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 766.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 762.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 758.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 758.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 756.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 741.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 738.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 735.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 729.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 726.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 716.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 714.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 714.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 695.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 694.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 691.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 676.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 670.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 667.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 655.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 651.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 632.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 630.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 591.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 580.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 536.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 524.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 508.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 499.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 486.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 482.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 481.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 435.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 404.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 332.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 331.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 331.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 232.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 229.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1607.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1607.1
FF:10176-103C5 60 years, female 1607.1

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.7
Macaque sample Sample description nTPM
Putamen
nTPM: 1.8
Samples: 2

Max nTPM: 2.2
Min nTPM: 1.3
Sample A 2.2
Sample B 1.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1767.9
Pig sample Sample description nTPM
Putamen
nTPM: 1767.9
Samples: 3

Max nTPM: 2591.2
Min nTPM: 1311.7
Sample B Female 1400.7
Sample C Male 2591.2
Sample D Male 1311.7

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