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RPS27A
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  • RPS27A
TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
Tissue methods
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:585.2 nTPM
GTEx:585.2 nTPM
FANTOM5:13.8 Scaled Tags Per Million
EYE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

585.2
GTEx sample id Sample description nTPM
Retina
Average nTPM: 585.2
Samples: 105

Max nTPM: 862.0
Min nTPM: 387.6
Std nTPM: 103.1
Median nTPM:
495_1 57 years, female 862.0
35_1 74 years, female 820.2
491_1 89 years, female 817.9
384_1 83 years, male 782.9
237_1 82 years, male 775.6
246_1 77 years, male 753.8
308_1 70 years, female 741.0
490_1 67 years, female 736.9
389_1 86 years, female 735.6
17_1 71 years, male 732.8
307_1 66 years, female 730.2
153_1 70 years, female 714.1
466_1 57 years, female 713.3
414_1 84 years, female 700.7
315_1 62 years, female 697.5
139_1 64 years, female 693.7
137_1 83 years, male 692.8
379_1 60 years, male 689.7
126_1 63 years, male 687.2
526_1 61 years, male 685.5
162_1 79 years, female 674.8
413_1 59 years, female 672.0
2_1 77 years, female 668.0
189_1 76 years, male 661.5
375_1 74 years, female 660.3
322_1 76 years, male 656.4
145_1 84 years, male 651.2
321_1 62 years, female 650.2
415_1 77 years, female 649.8
501_1 88 years, male 646.1
120_1 70 years, female 644.5
119_1 70 years, female 641.7
117_1 61 years, male 639.2
4_1 88 years, female 639.0
217_1 76 years, male 631.8
377_1 82 years, female 631.6
311_1 78 years, male 628.9
265_1 87 years, male 628.7
229_1 69 years, female 622.7
42_1 85 years, male 619.9
218_1 71 years, female 614.7
396_1 62 years, male 614.6
6_1 73 years, female 612.6
518_1 75 years, female 612.5
89_1 63 years, male 608.3
32_1 67 years, male 599.2
142_1 61 years, female 595.6
376_1 75 years, female 593.4
348_1 84 years, male 593.3
355_1 70 years, female 588.0
499_1 55 years, female 585.5
386_1 76 years, male 583.2
468_1 89 years, male 583.0
405_1 91 years, male 578.1
81_1 67 years, male 577.7
319_1 81 years, male 577.1
43_1 64 years, female 574.7
320_1 89 years, female 574.7
394_1 75 years, female 567.9
149_1 88 years, male 566.6
266_1 85 years, male 563.2
452_1 88 years, female 560.5
109_1 81 years, female 559.5
404_1 82 years, female 558.5
447_1 81 years, male 550.8
254_1 77 years, female 549.1
18_1 88 years, male 543.3
314_1 67 years, male 538.2
316_1 62 years, male 531.0
288_1 66 years, female 528.0
313_1 79 years, female 527.6
347_1 72 years, male 527.5
173_1 67 years, male 527.0
115_1 83 years, male 516.2
324_1 76 years, male 509.3
264_1 73 years, female 508.3
291_1 76 years, male 507.2
251_1 78 years, male 505.2
503_1 68 years, male 504.4
243_1 75 years, male 502.4
351_1 91 years, male 498.3
480_1 63 years, male 497.7
99_1 64 years, male 482.2
335_1 73 years, female 481.8
517_1 88 years, male 480.1
354_1 81 years, female 477.4
163_1 78 years, male 476.5
172_1 72 years, female 473.3
353_1 82 years, female 470.9
9_1 66 years, female 464.6
177_1 74 years, male 464.6
349_1 83 years, male 456.6
350_1 84 years, female 455.4
295_1 61 years, female 449.0
352_1 62 years, male 446.8
317_1 60 years, male 446.6
506_1 65 years, male 439.8
41_1 94 years, female 438.5
406_1 79 years, male 435.6
318_1 68 years, male 435.5
425_1 59 years, female 434.9
293_1 68 years, female 433.1
286_1 68 years, female 423.0
356_1 87 years, female 395.2
292_1 71 years, male 387.6
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

13.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 13.8
FF:10030-101E3 24-65 years, mixed 13.8

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