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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SCD5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:200.0 nTPM
HPA Brain:488.8 nTPM
GTEx:200.0 nTPM
Pig:110.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

488.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 337.8
2226 Male, age 75, left hemisphere 376.6
1961 Female, age 42, unknown 299.0
Dorsomedial nucleus
nTPM: 356.9
2017 Female, age 42, unknown 381.9
1989 Male, age 62, unknown 381.0
2041 Female, age 72, unknown 307.9
Lateral hypothalamic area
nTPM: 344.6
1791 Male, age 80, right hemisphere 432.2
2271 Male, age 75, both hemispheres 328.7
2228 Male, age 66, unknown 321.0
2412 Male, age 62, unknown 296.7
Mammillary body
nTPM: 488.8
1923 Female, age 72, unknown 526.8
2413 Male, age 66, unknown 509.5
1834 Female, age 42, unknown 497.9
1948 Female, age 72, unknown 461.8
1945 Male, age 80, right hemisphere 448.1
Paraventricular nucleus
nTPM: 351.9
2700 Male, age 62, unknown 351.9
Preoptic area
nTPM: 405.8
1861 Female, age 42, unknown 437.6
1907 Male, age 80, right hemisphere 417.6
2414 Female, age 72, unknown 362.2
Supraoptic nucleus
nTPM: 368.5
2043 Male, age 62, unknown 393.2
1894 Female, age 72, unknown 392.8
2835 Female, age 72, unknown 319.4
Ventromedial nucleus
nTPM: 325.4
1982 Female, age 72, unknown 336.2
1822 Female, age 42, unknown 314.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 200.0
Samples: 257

Max nTPM: 408.5
Min nTPM: 92.4
Std nTPM: 52.5
Median nTPM: 193.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 408.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 343.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 339.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 338.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 333.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 322.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 316.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 313.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 311.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 309.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 305.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 304.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 303.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 292.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 292.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 290.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 289.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 287.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 287.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 286.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 286.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 282.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 281.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 280.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 280.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 279.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 276.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 275.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 271.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 270.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 270.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 266.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 265.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 264.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 263.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 262.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 262.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 261.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 257.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 257.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 256.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 256.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 255.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 253.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 252.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 251.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 250.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 247.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 245.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 243.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 241.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 240.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 234.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 233.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 233.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 232.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 232.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 231.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 230.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 228.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 227.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 226.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 225.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 225.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 224.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 224.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 224.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 223.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 223.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 222.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 222.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 221.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 221.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 221.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 221.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 220.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 219.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 219.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 218.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 217.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 217.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 216.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 216.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 215.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 215.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 212.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 212.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 212.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 211.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 211.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 210.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 209.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 209.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 209.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 208.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 208.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 207.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 207.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 206.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 205.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 205.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 203.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 203.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 203.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 202.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 202.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 201.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 201.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 201.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 201.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 201.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 199.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 199.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 199.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 199.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 198.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 198.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 198.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 196.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 195.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 195.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 194.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 194.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 194.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 194.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 193.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 193.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 193.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 193.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 191.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 191.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 191.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 191.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 191.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 190.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 190.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 189.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 189.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 188.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 188.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 187.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 187.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 186.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 186.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 186.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 186.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 185.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 184.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 184.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 184.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 183.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 181.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 180.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 180.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 180.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 180.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 179.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 179.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 179.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 179.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 178.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 178.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 178.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 176.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 176.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 175.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 175.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 175.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 174.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 174.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 174.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 174.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 174.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 173.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 172.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 172.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 171.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 171.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 171.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 171.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 169.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 169.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 169.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 168.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 168.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 167.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 167.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 166.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 165.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 165.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 164.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 164.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 164.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 163.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 163.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 162.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 162.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 162.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 162.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 161.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 160.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 160.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 159.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 158.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 157.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 157.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 157.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 157.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 156.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 156.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 154.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 153.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 152.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 152.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 152.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 150.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 150.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 150.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 148.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 147.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 146.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 145.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 145.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 144.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 144.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 144.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 142.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 139.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 138.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 138.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 137.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 134.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 134.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 134.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 134.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 134.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 132.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 132.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 130.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 129.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 128.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 127.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 127.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 126.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 126.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 125.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 124.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 122.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 122.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 119.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 118.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 117.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 111.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 106.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 100.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 99.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 92.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 110.1
Samples: 4

Max nTPM: 144.7
Min nTPM: 73.4
Sample A Female 144.7
Sample B Female 117.3
Sample C Male 105.0
Sample D Male 73.4

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