HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:17.5 nTPM
HPA Brain:138.3 nTPM
GTEx:17.5 nTPM
FANTOM5:152.0 Scaled Tags Per Million
Pig:156.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026281Antibody HPA051783Antibody HPA051785Antibody HPA053973
Glial cells LowNot detectedNot detectedNot detected
Neuronal cells LowHighMediumHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 138.3
Sample id Sample description nTPM
Hippocampus
nTPM: 42.4
1898 Male, age 80, left hemisphere 62.2
2529 Female, age 94, left hemisphere 47.5
2621 Female, age 67, right hemisphere 39.2
1911 Female, age 85, right hemisphere 37.5
2148 Female, age 91, left hemisphere 34.4
1855 Male, age 76, left hemisphere 33.9
Dentate gyrus
nTPM: 53.0
2246 Female, age 85, both hemispheres 103.6
1927 Female, age 91, both hemispheres 60.2
2528 Male, age 74, both hemispheres 44.9
2531 Female, age 67, both hemispheres 41.4
2530 Female, age 94, left hemisphere 37.3
2010 Male, age 76, both hemispheres 30.5
Entorhinal gyrus
nTPM: 82.6
2764 Male, age 80, right hemisphere 109.4
1938 Female, age 85, left hemisphere 105.6
2613 Female, age 94, left hemisphere 95.4
1787 Male, age 76, left hemisphere 89.1
2686 Male, age 75, right hemisphere 52.5
2117 Female, age 91, right hemisphere 43.9
Hippocampus, CA1
nTPM: 67.0
2082 Female, age 91, right hemisphere 118.9
2749 Male, age 80, left hemisphere 73.0
1873 Female, age 85, both hemispheres 58.1
2527 Male, age 74, both hemispheres 54.3
2045 Male, age 76, both hemispheres 31.0
Hippocampus, CA2
nTPM: 61.8
1940 Female, age 85, left hemisphere 91.3
1892 Male, age 76, both hemispheres 74.9
2113 Female, age 91, right hemisphere 70.9
2249 Male, age 74, both hemispheres 58.8
1963 Male, age 80, left hemisphere 38.9
2437 Female, age 94, left hemisphere 36.0
Hippocampus, CA3
nTPM: 46.4
1867 Male, age 76, both hemispheres 56.6
1891 Female, age 85, both hemispheres 50.6
2137 Male, age 80, left hemisphere 50.0
2436 Male, age 74, both hemispheres 48.3
2620 Female, age 94, left hemisphere 37.7
2861 Female, age 67, both hemispheres 35.5
Parahippocampal cortex
nTPM: 89.8
1933 Female, age 85, both hemispheres 131.8
1850 Male, age 80, both hemispheres 126.3
2250 Female, age 67, right hemisphere 110.9
1990 Female, age 91, right hemisphere 96.5
2245 Female, age 91, both hemispheres 93.9
2532 Female, age 72, left hemisphere 81.7
2018 Male, age 76, both hemispheres 77.2
2693 Female, age 94, both hemispheres 63.8
2622 Female, age 67, right hemisphere 59.7
2692 Male, age 74, both hemispheres 56.3
Perirhinal gyrus
nTPM: 138.3
1847 Female, age 91, left hemisphere 204.2
1794 Male, age 80, right hemisphere 156.4
2521 Female, age 94, right hemisphere 141.5
1841 Female, age 85, right hemisphere 117.2
2848 Male, age 76, right hemisphere 72.2
Subiculum
nTPM: 62.8
1977 Female, age 85, both hemispheres 124.5
2619 Male, age 74, both hemispheres 60.0
1901 Male, age 80, both hemispheres 58.1
2438 Female, age 94, left hemisphere 55.8
2042 Male, age 76, both hemispheres 42.8
2729 Female, age 91, right hemisphere 35.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.5
Samples: 255

Max nTPM: 67.2
Min nTPM: 4.6
Std nTPM: 9.4
Median nTPM: 14.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 67.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 61.9
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 49.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 44.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 44.3
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 40.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 39.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 39.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 39.4
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 39.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 152.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.0
FF:10169-103B7 60 years, female 173.4
FF:10153-102I9 76 years, female 130.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 156.2
Pig sample Sample description nTPM
Subiculum
nTPM: 156.2
Samples: 4

Max nTPM: 195.5
Min nTPM: 121.7
Sample A Female 195.5
Sample B Female 162.7
Sample C Male 121.7
Sample D Male 144.8
Dorsal hippocampus
nTPM: 91.5
Samples: 4

Max nTPM: 121.6
Min nTPM: 74.7
Sample A Female 74.7
Sample B Female 88.0
Sample C Male 121.6
Sample D Male 81.7
Entorhinal cortex
nTPM: 85.1
Samples: 4

Max nTPM: 90.9
Min nTPM: 78.0
Sample A Female 78.0
Sample B Female 90.3
Sample C Male 90.9
Sample D Male 81.0
Ventral hippocampus
nTPM: 76.4
Samples: 4

Max nTPM: 89.9
Min nTPM: 58.4
Sample A Female 58.4
Sample B Female 80.3
Sample C Male 77.1
Sample D Male 89.9

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