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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • CELL LINE

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  • EVOLUTION

  • CAMK2D
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN35 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT10 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM7 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE11 SKIN3 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE DURA MATER EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:19.8 nTPM
GTEx:10.5 nTPM
FANTOM5:66.8 Scaled Tags Per Million
Pig:33.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.8
Sample id Sample description nTPM
Putamen
nTPM: 19.8
2482 Female, age 94, left hemisphere 34.9
2647 Male, age 75, left hemisphere 23.5
2466 Female, age 79, unknown 21.4
1937 Female, age 91, right hemisphere 18.1
1829 Male, age 74, unknown 15.7
1838 Male, age 80, right hemisphere 13.4
2489 Female, age 72, unknown 11.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 10.5
Samples: 254

Max nTPM: 56.2
Min nTPM: 3.9
Std nTPM: 4.0
Median nTPM: 9.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 56.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 20.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 19.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 18.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 18.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 17.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 17.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 16.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 16.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 16.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 15.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 15.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 15.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 15.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 15.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 14.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 14.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 14.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 14.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 14.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 14.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 14.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 14.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 14.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 14.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 14.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 13.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 13.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 13.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 13.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 13.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 13.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 13.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 13.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 13.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 13.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 13.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 13.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 13.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 12.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 12.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 12.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 12.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 12.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 12.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 12.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 12.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 12.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 12.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 12.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 11.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 11.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 11.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 11.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 11.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 11.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 11.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 11.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 11.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 11.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 11.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 11.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 11.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 11.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 11.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 11.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 11.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 11.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 11.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 11.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 11.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 11.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 11.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 11.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 11.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 11.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 10.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 10.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 10.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 10.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 10.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 10.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 10.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 10.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 10.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 10.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 10.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 10.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 10.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 10.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 10.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 10.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 10.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 10.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 10.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 10.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 10.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 10.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 10.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 10.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 10.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 10.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 10.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 10.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 10.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 10.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 10.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 10.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 10.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 9.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 9.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 9.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 9.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 9.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 9.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 9.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 9.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 9.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 9.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 9.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 9.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 9.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 9.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 9.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 9.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 9.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 9.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 9.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 9.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 9.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 9.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 9.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 9.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 9.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 9.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 9.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 9.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 9.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 9.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 9.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 9.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 9.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 9.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 8.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 8.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 8.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 8.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 8.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 8.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 8.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 8.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 8.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 8.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 8.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 8.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 8.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 8.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 8.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 8.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 8.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 8.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 8.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 8.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 8.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 8.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 8.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 8.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 8.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 8.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 8.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 8.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 8.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 7.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 7.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 7.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 7.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 7.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 7.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 7.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 7.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 7.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 7.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 7.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 7.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 7.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 7.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 7.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 7.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 7.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 7.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 7.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 7.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 7.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 7.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 6.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 6.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 6.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 6.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 6.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 6.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 6.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 5.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 5.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 5.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 5.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 5.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 4.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 3.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 66.8
FF:10176-103C5 60 years, female 66.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.6
Pig sample Sample description nTPM
Putamen
nTPM: 33.7
Samples: 3

Max nTPM: 36.1
Min nTPM: 29.6
Sample B Female 29.6
Sample C Male 35.3
Sample D Male 36.1

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