HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:1069.4 nTPM
HPA Brain:273.7 nTPM
GTEx:1069.4 nTPM
FANTOM5:23.4 Scaled Tags Per Million
Pig:402.3 nTPM
Mouse:799.3 nTPM
Allen mouse:19.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047100
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 273.7
Sample id Sample description nTPM
Hippocampus
nTPM: 268.5
2529 Female, age 94, left hemisphere 321.4
1898 Male, age 80, left hemisphere 309.6
2621 Female, age 67, right hemisphere 262.1
1911 Female, age 85, right hemisphere 254.6
2148 Female, age 91, left hemisphere 236.0
1855 Male, age 76, left hemisphere 227.4
Dentate gyrus
nTPM: 271.0
2530 Female, age 94, left hemisphere 355.7
2010 Male, age 76, both hemispheres 281.1
2531 Female, age 67, both hemispheres 253.4
2528 Male, age 74, both hemispheres 249.0
2246 Female, age 85, both hemispheres 246.7
1927 Female, age 91, both hemispheres 240.1
Entorhinal gyrus
nTPM: 261.0
2686 Male, age 75, right hemisphere 305.7
2117 Female, age 91, right hemisphere 285.8
1787 Male, age 76, left hemisphere 277.0
1938 Female, age 85, left hemisphere 254.7
2764 Male, age 80, right hemisphere 242.8
2613 Female, age 94, left hemisphere 199.6
Hippocampus, CA1
nTPM: 261.2
2082 Female, age 91, right hemisphere 271.2
1873 Female, age 85, both hemispheres 267.6
2527 Male, age 74, both hemispheres 256.6
2045 Male, age 76, both hemispheres 255.6
2749 Male, age 80, left hemisphere 254.9
Hippocampus, CA2
nTPM: 272.7
1963 Male, age 80, left hemisphere 320.7
1892 Male, age 76, both hemispheres 282.5
1940 Female, age 85, left hemisphere 267.6
2113 Female, age 91, right hemisphere 264.2
2249 Male, age 74, both hemispheres 257.4
2437 Female, age 94, left hemisphere 243.9
Hippocampus, CA3
nTPM: 233.1
1867 Male, age 76, both hemispheres 300.1
1891 Female, age 85, both hemispheres 270.6
2137 Male, age 80, left hemisphere 229.1
2861 Female, age 67, both hemispheres 225.1
2436 Male, age 74, both hemispheres 210.0
2620 Female, age 94, left hemisphere 163.6
Parahippocampal cortex
nTPM: 242.7
2018 Male, age 76, both hemispheres 327.7
1850 Male, age 80, both hemispheres 272.6
2250 Female, age 67, right hemisphere 269.0
1990 Female, age 91, right hemisphere 268.7
1933 Female, age 85, both hemispheres 239.4
2245 Female, age 91, both hemispheres 233.1
2532 Female, age 72, left hemisphere 227.3
2692 Male, age 74, both hemispheres 215.8
2693 Female, age 94, both hemispheres 191.6
2622 Female, age 67, right hemisphere 181.8
Perirhinal gyrus
nTPM: 273.7
1841 Female, age 85, right hemisphere 297.6
2848 Male, age 76, right hemisphere 286.6
1794 Male, age 80, right hemisphere 271.7
1847 Female, age 91, left hemisphere 265.1
2521 Female, age 94, right hemisphere 247.4
Subiculum
nTPM: 258.2
1977 Female, age 85, both hemispheres 305.2
2042 Male, age 76, both hemispheres 268.3
1901 Male, age 80, both hemispheres 258.6
2729 Female, age 91, right hemisphere 255.9
2438 Female, age 94, left hemisphere 251.7
2619 Male, age 74, both hemispheres 209.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1069.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1069.4
Samples: 255

Max nTPM: 3708.5
Min nTPM: 498.6
Std nTPM: 383.0
Median nTPM: 997.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3708.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2516.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2363.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2054.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2024.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 2024.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1980.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1931.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1930.9
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1906.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1887.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.4
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 22.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 402.3
Pig sample Sample description nTPM
Subiculum
nTPM: 368.8
Samples: 4

Max nTPM: 511.3
Min nTPM: 300.3
Sample A Female 511.3
Sample B Female 345.0
Sample C Male 300.3
Sample D Male 318.7
Dorsal hippocampus
nTPM: 402.3
Samples: 4

Max nTPM: 524.2
Min nTPM: 289.8
Sample A Female 524.2
Sample B Female 360.0
Sample C Male 435.3
Sample D Male 289.8
Entorhinal cortex
nTPM: 362.2
Samples: 4

Max nTPM: 502.6
Min nTPM: 244.4
Sample A Female 301.1
Sample B Female 502.6
Sample C Male 400.5
Sample D Male 244.4
Ventral hippocampus
nTPM: 341.1
Samples: 4

Max nTPM: 360.4
Min nTPM: 323.1
Sample A Female 360.4
Sample B Female 336.8
Sample C Male 344.0
Sample D Male 323.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 799.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 769.4
Samples: 4

Max nTPM: 816.3
Min nTPM: 740.5
Sample A Male 777.4
Sample B Male 743.2
Sample C Female 816.3
Sample D Female 740.5
Hippocampal formation
nTPM: 799.3
Samples: 4

Max nTPM: 906.9
Min nTPM: 730.5
Sample A Male 906.9
Sample B Male 753.4
Sample C Female 806.5
Sample D Female 730.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.7
68191186 Antisense, RP_041122_02_H09, Mouse strain C57BL/6J (56 days, male) 19.7

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