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  • TISSUE

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  • RPS3A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1038.9 nTPM
HPA Brain:414.1 nTPM
GTEx:1038.9 nTPM
Pig:448.5 nTPM
Mouse:944.3 nTPM
Allen mouse:22.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

414.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 317.9
1961 Female, age 42, unknown 360.8
2226 Male, age 75, left hemisphere 275.0
Dorsomedial nucleus
nTPM: 299.8
2041 Female, age 72, unknown 314.3
2017 Female, age 42, unknown 311.4
1989 Male, age 62, unknown 273.7
Lateral hypothalamic area
nTPM: 355.9
2228 Male, age 66, unknown 393.1
2412 Male, age 62, unknown 348.6
1791 Male, age 80, right hemisphere 346.2
2271 Male, age 75, both hemispheres 335.9
Mammillary body
nTPM: 328.0
1945 Male, age 80, right hemisphere 364.3
1948 Female, age 72, unknown 355.3
1923 Female, age 72, unknown 329.7
1834 Female, age 42, unknown 322.6
2413 Male, age 66, unknown 267.9
Paraventricular nucleus
nTPM: 341.0
2700 Male, age 62, unknown 341.0
Preoptic area
nTPM: 312.2
1861 Female, age 42, unknown 350.1
2414 Female, age 72, unknown 299.3
1907 Male, age 80, right hemisphere 287.4
Supraoptic nucleus
nTPM: 414.1
1894 Female, age 72, unknown 506.2
2043 Male, age 62, unknown 374.4
2835 Female, age 72, unknown 361.8
Ventromedial nucleus
nTPM: 386.9
1982 Female, age 72, unknown 423.5
1822 Female, age 42, unknown 350.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1038.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1038.9
Samples: 257

Max nTPM: 3552.1
Min nTPM: 450.5
Std nTPM: 426.9
Median nTPM: 930.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 3552.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3451.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 3115.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2698.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2591.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 2308.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 2231.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 2196.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 2077.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 2069.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1980.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1911.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1794.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1779.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1745.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1702.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1699.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1679.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1521.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1486.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1477.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1475.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1468.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1463.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1450.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1418.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1418.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1409.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1406.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1403.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1387.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1384.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1378.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1371.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1347.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1338.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1322.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1320.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1318.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1306.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1305.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1288.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1284.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1273.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1271.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1244.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 1243.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1234.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1228.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1222.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1215.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1212.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1207.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1201.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1201.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1198.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1189.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1180.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1171.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1168.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1154.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1146.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1143.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1140.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1140.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1138.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1131.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1126.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1119.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1118.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1116.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1114.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 1114.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1112.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1107.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1107.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1106.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1099.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1097.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1092.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1092.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1086.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1082.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1075.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1074.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1067.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 1059.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1058.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1055.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 1055.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1052.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1048.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 1041.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 1039.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1035.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1031.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1029.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 1028.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1027.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 1026.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1021.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 1016.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 1016.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1008.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1005.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1004.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1003.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1000.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 990.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 988.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 979.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 972.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 967.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 965.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 965.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 962.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 951.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 951.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 947.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 944.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 941.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 940.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 937.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 937.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 935.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 934.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 933.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 933.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 930.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 925.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 923.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 921.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 921.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 919.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 918.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 917.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 917.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 916.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 916.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 904.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 902.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 901.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 901.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 898.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 893.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 890.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 890.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 887.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 883.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 882.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 880.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 879.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 878.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 878.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 875.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 874.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 871.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 871.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 870.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 869.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 861.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 860.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 858.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 858.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 857.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 855.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 854.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 844.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 844.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 842.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 842.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 834.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 832.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 828.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 826.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 824.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 823.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 823.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 819.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 814.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 814.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 814.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 807.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 806.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 806.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 804.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 801.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 798.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 797.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 797.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 797.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 796.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 790.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 789.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 786.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 785.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 784.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 783.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 774.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 772.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 770.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 769.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 769.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 768.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 766.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 765.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 761.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 759.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 757.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 755.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 752.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 748.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 741.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 733.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 726.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 722.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 720.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 719.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 711.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 706.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 706.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 706.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 704.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 703.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 702.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 701.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 696.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 695.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 690.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 690.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 688.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 680.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 677.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 675.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 672.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 670.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 667.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 665.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 655.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 650.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 648.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 643.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 643.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 639.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 638.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 637.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 636.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 629.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 629.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 604.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 602.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 596.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 594.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 589.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 576.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 527.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 450.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

448.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 448.4
Samples: 4

Max nTPM: 656.1
Min nTPM: 278.9
Sample A Female 656.1
Sample B Female 437.2
Sample C Male 421.5
Sample D Male 278.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

944.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 944.3
Samples: 4

Max nTPM: 1079.5
Min nTPM: 870.2
Sample A Male 897.4
Sample B Male 1079.5
Sample C Female 929.9
Sample D Female 870.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 22.0
68191186 Antisense, RP_041122_02_H09, Mouse strain C57BL/6J (56 days, male) 22.0

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