HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:141.4 nTPM
HPA Brain:52.6 nTPM
GTEx:141.4 nTPM
FANTOM5:116.0 Scaled Tags Per Million
Pig:40.2 nTPM
Mouse:181.7 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064221
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.6
Sample id Sample description nTPM
Hippocampus
nTPM: 52.6
2529 Female, age 94, left hemisphere 64.7
2621 Female, age 67, right hemisphere 53.8
1898 Male, age 80, left hemisphere 53.3
1855 Male, age 76, left hemisphere 52.6
2148 Female, age 91, left hemisphere 47.6
1911 Female, age 85, right hemisphere 43.4
Dentate gyrus
nTPM: 48.2
2530 Female, age 94, left hemisphere 64.9
2010 Male, age 76, both hemispheres 53.2
2246 Female, age 85, both hemispheres 50.0
2531 Female, age 67, both hemispheres 46.2
1927 Female, age 91, both hemispheres 39.7
2528 Male, age 74, both hemispheres 35.4
Entorhinal gyrus
nTPM: 43.3
2117 Female, age 91, right hemisphere 49.2
1938 Female, age 85, left hemisphere 47.4
2764 Male, age 80, right hemisphere 47.0
1787 Male, age 76, left hemisphere 42.3
2686 Male, age 75, right hemisphere 41.4
2613 Female, age 94, left hemisphere 32.3
Hippocampus, CA1
nTPM: 50.7
2749 Male, age 80, left hemisphere 68.7
2527 Male, age 74, both hemispheres 57.6
1873 Female, age 85, both hemispheres 51.3
2045 Male, age 76, both hemispheres 44.9
2082 Female, age 91, right hemisphere 31.3
Hippocampus, CA2
nTPM: 48.7
1892 Male, age 76, both hemispheres 59.3
1963 Male, age 80, left hemisphere 50.8
1940 Female, age 85, left hemisphere 50.1
2437 Female, age 94, left hemisphere 49.7
2249 Male, age 74, both hemispheres 49.6
2113 Female, age 91, right hemisphere 33.0
Hippocampus, CA3
nTPM: 48.4
2436 Male, age 74, both hemispheres 61.7
1867 Male, age 76, both hemispheres 54.1
2137 Male, age 80, left hemisphere 48.1
1891 Female, age 85, both hemispheres 47.3
2620 Female, age 94, left hemisphere 40.3
2861 Female, age 67, both hemispheres 39.1
Parahippocampal cortex
nTPM: 45.7
2245 Female, age 91, both hemispheres 66.3
2532 Female, age 72, left hemisphere 50.2
1850 Male, age 80, both hemispheres 49.8
2018 Male, age 76, both hemispheres 46.9
1990 Female, age 91, right hemisphere 44.7
1933 Female, age 85, both hemispheres 43.6
2692 Male, age 74, both hemispheres 41.4
2250 Female, age 67, right hemisphere 41.3
2622 Female, age 67, right hemisphere 40.4
2693 Female, age 94, both hemispheres 32.0
Perirhinal gyrus
nTPM: 46.3
1794 Male, age 80, right hemisphere 50.9
1841 Female, age 85, right hemisphere 49.9
1847 Female, age 91, left hemisphere 47.1
2521 Female, age 94, right hemisphere 44.5
2848 Male, age 76, right hemisphere 39.1
Subiculum
nTPM: 48.7
1901 Male, age 80, both hemispheres 56.2
2438 Female, age 94, left hemisphere 55.6
2042 Male, age 76, both hemispheres 52.7
1977 Female, age 85, both hemispheres 49.0
2619 Male, age 74, both hemispheres 45.8
2729 Female, age 91, right hemisphere 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 141.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 141.4
Samples: 255

Max nTPM: 313.1
Min nTPM: 50.5
Std nTPM: 38.0
Median nTPM: 133.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 313.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 282.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 274.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 267.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 260.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 259.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 256.5
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 250.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 246.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 235.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 227.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 116.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.0
FF:10169-103B7 60 years, female 154.7
FF:10153-102I9 76 years, female 77.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 40.2
Pig sample Sample description nTPM
Subiculum
nTPM: 37.1
Samples: 4

Max nTPM: 50.4
Min nTPM: 31.1
Sample A Female 50.4
Sample B Female 32.6
Sample C Male 34.3
Sample D Male 31.1
Dorsal hippocampus
nTPM: 40.2
Samples: 4

Max nTPM: 51.3
Min nTPM: 31.0
Sample A Female 51.3
Sample B Female 35.8
Sample C Male 42.7
Sample D Male 31.0
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 45.3
Min nTPM: 34.2
Sample A Female 35.6
Sample B Female 45.3
Sample C Male 42.8
Sample D Male 34.2
Ventral hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 46.7
Min nTPM: 28.6
Sample A Female 41.1
Sample B Female 28.6
Sample C Male 46.7
Sample D Male 38.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 181.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 181.7
Samples: 4

Max nTPM: 188.2
Min nTPM: 174.2
Sample A Male 174.2
Sample B Male 184.6
Sample C Female 188.2
Sample D Female 179.8
Hippocampal formation
nTPM: 162.0
Samples: 4

Max nTPM: 191.0
Min nTPM: 146.3
Sample A Male 191.0
Sample B Male 152.1
Sample C Female 158.5
Sample D Female 146.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
75214950 Antisense, RP_060427_02_B06, Mouse strain C57BL/6J (56 days, male) 0.3

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