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  • NDUFS6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:134.6 nTPM
HPA Brain:78.9 nTPM
GTEx:134.6 nTPM
Pig:36.9 nTPM
Mouse:169.6 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 52.0
2226 Male, age 75, left hemisphere 59.6
1961 Female, age 42, unknown 44.4
Dorsomedial nucleus
nTPM: 47.3
1989 Male, age 62, unknown 52.0
2041 Female, age 72, unknown 48.9
2017 Female, age 42, unknown 41.0
Lateral hypothalamic area
nTPM: 60.3
2228 Male, age 66, unknown 74.3
1791 Male, age 80, right hemisphere 57.7
2271 Male, age 75, both hemispheres 55.4
2412 Male, age 62, unknown 53.6
Mammillary body
nTPM: 59.6
1948 Female, age 72, unknown 71.8
1923 Female, age 72, unknown 67.3
2413 Male, age 66, unknown 58.7
1945 Male, age 80, right hemisphere 53.5
1834 Female, age 42, unknown 46.8
Paraventricular nucleus
nTPM: 78.9
2700 Male, age 62, unknown 78.9
Preoptic area
nTPM: 55.7
1861 Female, age 42, unknown 61.8
1907 Male, age 80, right hemisphere 53.9
2414 Female, age 72, unknown 51.6
Supraoptic nucleus
nTPM: 59.8
2835 Female, age 72, unknown 67.3
2043 Male, age 62, unknown 56.6
1894 Female, age 72, unknown 55.6
Ventromedial nucleus
nTPM: 43.9
1982 Female, age 72, unknown 51.6
1822 Female, age 42, unknown 36.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 134.6
Samples: 257

Max nTPM: 280.3
Min nTPM: 47.5
Std nTPM: 32.0
Median nTPM: 128.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 280.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 258.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 257.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 243.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 222.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 222.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 217.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 213.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 211.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 206.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 199.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 197.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 196.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 195.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 194.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 193.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 191.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 188.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 188.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 183.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 181.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 180.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 176.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 175.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 175.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 174.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 173.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 172.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 171.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 170.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 166.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 165.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 165.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 163.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 162.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 162.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 160.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 159.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 159.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 159.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 159.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 158.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 158.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 158.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 158.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 157.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 157.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 157.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 156.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 155.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 153.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 152.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 152.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 152.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 151.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 151.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 150.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 149.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 149.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 148.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 148.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 148.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 148.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 147.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 147.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 147.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 147.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 146.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 146.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 146.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 146.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 145.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 144.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 143.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 143.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 143.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 143.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 143.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 143.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 143.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 143.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 142.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 142.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 141.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 141.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 141.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 141.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 141.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 141.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 140.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 140.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 139.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 139.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 138.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 138.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 138.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 138.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 137.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 137.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 137.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 136.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 135.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 135.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 135.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 135.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 135.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 134.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 134.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 134.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 133.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 133.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 132.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 132.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 132.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 132.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 132.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 132.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 131.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 131.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 130.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 130.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 130.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 130.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 130.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 129.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 129.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 129.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 129.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 128.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 128.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 128.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 127.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 127.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 127.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 127.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 127.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 127.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 127.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 126.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 126.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 126.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 126.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 126.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 126.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 126.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 125.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 125.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 125.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 125.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 124.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 124.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 123.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 123.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 123.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 123.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 123.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 122.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 122.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 121.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 121.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 121.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 121.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 121.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 120.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 120.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 120.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 119.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 119.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 118.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 118.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 118.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 118.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 117.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 117.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 117.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 117.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 117.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 117.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 116.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 116.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 116.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 116.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 116.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 116.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 116.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 115.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 115.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 115.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 115.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 115.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 113.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 113.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 113.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 112.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 112.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 112.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 112.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 112.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 111.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 111.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 111.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 111.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 110.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 110.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 110.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 110.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 110.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 110.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 110.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 110.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 109.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 109.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 109.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 108.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 108.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 108.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 108.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 108.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 107.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 107.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 107.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 107.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 106.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 106.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 105.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 105.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 105.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 105.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 104.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 104.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 104.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 104.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 103.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 103.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 103.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 102.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 101.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 101.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 101.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 101.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 100.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 100.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 99.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 99.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 99.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 98.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 98.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 96.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 93.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 92.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 89.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 88.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 85.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 74.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 68.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 51.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 47.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 36.9
Samples: 4

Max nTPM: 46.7
Min nTPM: 28.0
Sample A Female 46.7
Sample B Female 39.4
Sample C Male 33.6
Sample D Male 28.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 169.6
Samples: 4

Max nTPM: 201.2
Min nTPM: 154.7
Sample A Male 160.6
Sample B Male 201.2
Sample C Female 162.0
Sample D Female 154.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
75214950 Antisense, RP_060427_02_B06, Mouse strain C57BL/6J (56 days, male) 0.2

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