HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:234.7 nTPM
HPA Brain:110.4 nTPM
GTEx:234.7 nTPM
FANTOM5:68.0 Scaled Tags Per Million
Pig:133.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 110.4
Sample id Sample description nTPM
Hippocampus
nTPM: 106.7
2529 Female, age 94, left hemisphere 131.0
2621 Female, age 67, right hemisphere 125.0
1911 Female, age 85, right hemisphere 101.9
1898 Male, age 80, left hemisphere 101.0
1855 Male, age 76, left hemisphere 94.7
2148 Female, age 91, left hemisphere 86.7
Dentate gyrus
nTPM: 107.5
2530 Female, age 94, left hemisphere 168.6
2010 Male, age 76, both hemispheres 111.4
2246 Female, age 85, both hemispheres 110.4
2531 Female, age 67, both hemispheres 98.2
1927 Female, age 91, both hemispheres 80.7
2528 Male, age 74, both hemispheres 75.7
Entorhinal gyrus
nTPM: 96.0
1787 Male, age 76, left hemisphere 113.1
2686 Male, age 75, right hemisphere 110.4
2764 Male, age 80, right hemisphere 101.3
2117 Female, age 91, right hemisphere 92.4
1938 Female, age 85, left hemisphere 91.9
2613 Female, age 94, left hemisphere 67.0
Hippocampus, CA1
nTPM: 98.2
2045 Male, age 76, both hemispheres 106.1
2527 Male, age 74, both hemispheres 100.1
1873 Female, age 85, both hemispheres 98.7
2082 Female, age 91, right hemisphere 94.1
2749 Male, age 80, left hemisphere 92.1
Hippocampus, CA2
nTPM: 99.7
2437 Female, age 94, left hemisphere 122.7
1963 Male, age 80, left hemisphere 108.3
1892 Male, age 76, both hemispheres 97.5
2113 Female, age 91, right hemisphere 93.4
2249 Male, age 74, both hemispheres 91.6
1940 Female, age 85, left hemisphere 84.7
Hippocampus, CA3
nTPM: 82.9
1867 Male, age 76, both hemispheres 106.3
1891 Female, age 85, both hemispheres 98.4
2137 Male, age 80, left hemisphere 81.9
2861 Female, age 67, both hemispheres 77.4
2436 Male, age 74, both hemispheres 77.1
2620 Female, age 94, left hemisphere 56.1
Parahippocampal cortex
nTPM: 95.2
2018 Male, age 76, both hemispheres 124.9
2532 Female, age 72, left hemisphere 116.9
2250 Female, age 67, right hemisphere 103.3
2245 Female, age 91, both hemispheres 99.6
1933 Female, age 85, both hemispheres 95.1
1990 Female, age 91, right hemisphere 92.4
1850 Male, age 80, both hemispheres 91.4
2692 Male, age 74, both hemispheres 87.0
2622 Female, age 67, right hemisphere 76.2
2693 Female, age 94, both hemispheres 64.8
Perirhinal gyrus
nTPM: 97.7
2848 Male, age 76, right hemisphere 107.1
1841 Female, age 85, right hemisphere 104.7
1794 Male, age 80, right hemisphere 102.0
1847 Female, age 91, left hemisphere 95.7
2521 Female, age 94, right hemisphere 78.9
Subiculum
nTPM: 110.4
2438 Female, age 94, left hemisphere 166.9
1977 Female, age 85, both hemispheres 124.2
2042 Male, age 76, both hemispheres 107.9
1901 Male, age 80, both hemispheres 92.7
2729 Female, age 91, right hemisphere 87.1
2619 Male, age 74, both hemispheres 83.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 234.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 234.7
Samples: 255

Max nTPM: 773.6
Min nTPM: 65.2
Std nTPM: 104.5
Median nTPM: 213.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 773.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 742.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 708.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 599.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 581.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 571.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 549.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 524.0
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 519.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 440.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 422.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 68.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.0
FF:10169-103B7 60 years, female 76.8
FF:10153-102I9 76 years, female 59.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 133.2
Pig sample Sample description nTPM
Subiculum
nTPM: 116.5
Samples: 4

Max nTPM: 162.9
Min nTPM: 90.2
Sample A Female 162.9
Sample B Female 114.2
Sample C Male 98.5
Sample D Male 90.2
Dorsal hippocampus
nTPM: 133.2
Samples: 4

Max nTPM: 167.4
Min nTPM: 85.3
Sample A Female 160.0
Sample B Female 120.2
Sample C Male 167.4
Sample D Male 85.3
Entorhinal cortex
nTPM: 130.5
Samples: 4

Max nTPM: 149.7
Min nTPM: 94.0
Sample A Female 129.7
Sample B Female 149.7
Sample C Male 148.5
Sample D Male 94.0
Ventral hippocampus
nTPM: 123.6
Samples: 4

Max nTPM: 147.2
Min nTPM: 103.4
Sample A Female 126.5
Sample B Female 117.2
Sample C Male 147.2
Sample D Male 103.4

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