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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:88.1 nTPM
HPA Brain:39.3 nTPM
GTEx:88.1 nTPM
Pig:51.7 nTPM
Mouse:80.5 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 38.3
2226 Male, age 75, left hemisphere 42.8
1961 Female, age 42, unknown 33.7
Dorsomedial nucleus
nTPM: 33.3
2041 Female, age 72, unknown 46.7
1989 Male, age 62, unknown 30.4
2017 Female, age 42, unknown 22.8
Lateral hypothalamic area
nTPM: 29.5
1791 Male, age 80, right hemisphere 34.6
2271 Male, age 75, both hemispheres 32.2
2228 Male, age 66, unknown 30.5
2412 Male, age 62, unknown 20.9
Mammillary body
nTPM: 25.4
1923 Female, age 72, unknown 28.4
2413 Male, age 66, unknown 26.9
1945 Male, age 80, right hemisphere 24.3
1948 Female, age 72, unknown 24.1
1834 Female, age 42, unknown 23.3
Paraventricular nucleus
nTPM: 20.6
2700 Male, age 62, unknown 20.6
Preoptic area
nTPM: 24.2
1907 Male, age 80, right hemisphere 27.9
2414 Female, age 72, unknown 22.9
1861 Female, age 42, unknown 21.9
Supraoptic nucleus
nTPM: 39.3
1894 Female, age 72, unknown 52.6
2043 Male, age 62, unknown 40.3
2835 Female, age 72, unknown 25.1
Ventromedial nucleus
nTPM: 32.0
1822 Female, age 42, unknown 35.4
1982 Female, age 72, unknown 28.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 88.1
Samples: 257

Max nTPM: 233.3
Min nTPM: 33.7
Std nTPM: 29.4
Median nTPM: 81.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 233.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 199.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 185.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 181.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 177.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 173.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 163.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 159.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 158.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 157.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 157.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 156.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 156.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 151.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 146.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 145.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 138.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 137.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 134.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 133.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 129.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 128.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 128.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 127.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 127.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 127.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 125.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 125.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 125.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 124.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 124.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 122.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 122.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 120.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 116.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 115.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 115.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 115.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 115.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 115.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 112.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 110.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 109.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 108.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 108.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 107.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 107.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 106.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 106.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 106.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 105.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 105.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 105.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 104.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 102.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 102.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 100.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 100.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 99.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 99.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 98.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 97.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 97.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 97.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 97.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 97.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 96.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 96.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 96.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 96.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 96.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 96.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 96.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 95.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 95.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 95.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 95.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 94.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 93.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 93.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 93.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 92.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 92.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 92.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 92.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 92.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 91.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 91.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 91.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 91.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 91.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 89.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 89.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 89.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 88.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 88.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 87.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 87.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 87.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 87.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 87.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 86.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 86.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 86.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 86.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 86.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 86.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 86.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 86.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 86.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 85.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 85.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 85.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 85.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 85.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 85.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 84.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 84.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 84.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 84.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 84.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 83.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 83.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 83.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 83.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 82.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 82.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 82.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 81.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 81.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 81.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 80.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 80.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 79.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 79.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 79.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 79.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 79.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 79.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 79.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 78.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 78.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 78.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 78.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 78.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 78.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 77.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 77.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 77.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 77.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 76.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 76.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 76.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 75.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 75.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 75.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 75.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 75.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 75.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 75.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 75.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 75.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 75.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 74.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 74.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 74.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 74.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 74.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 74.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 74.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 74.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 74.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 73.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 73.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 73.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 73.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 72.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 72.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 72.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 71.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 71.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 71.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 71.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 71.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 71.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 71.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 70.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 70.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 70.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 69.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 68.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 68.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 68.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 68.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 68.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 68.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 68.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 68.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 68.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 67.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 67.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 67.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 67.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 66.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 66.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 66.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 65.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 65.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 65.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 65.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 65.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 65.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 64.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 64.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 64.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 64.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 64.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 64.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 64.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 63.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 63.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 63.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 62.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 62.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 62.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 60.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 60.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 60.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 60.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 60.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 59.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 59.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 59.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 59.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 58.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 58.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 57.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 56.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 56.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 55.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 55.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 55.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 53.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 52.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 51.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 51.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 50.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 48.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 48.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 46.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 45.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 43.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 41.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 36.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 35.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 33.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 51.7
Samples: 4

Max nTPM: 54.8
Min nTPM: 47.9
Sample A Female 54.8
Sample B Female 54.0
Sample C Male 50.2
Sample D Male 47.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 80.5
Samples: 4

Max nTPM: 86.0
Min nTPM: 75.9
Sample A Male 77.2
Sample B Male 82.8
Sample C Female 86.0
Sample D Female 75.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
69838701 Antisense, RP_050317_04_F04, Mouse strain C57BL/6J (56 days, male) 1.2
77910681 Antisense, RP_070208_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0

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