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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Medium
Ovarian stroma cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:7828.3 nTPM
HPA:7828.3 nTPM
GTEx:6875.9 nTPM
FANTOM5:107.9 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA011311Antibody CAB010339
Follicle cells Medium-
Ovarian stroma cells MediumHigh





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7828.3
overview
Female, age 64
Ovary sample 192
nTPM: 6429.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 8197.6
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 7482.5
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 6979.5
N/A
Female, age 16
Ovary sample 3663
nTPM: 13277.3
N/A
Female, age 20
Ovary sample 3664
nTPM: 7640.7
N/A
Female, age 32
Ovary sample 3665
nTPM: 4790.8

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6875.9
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 6875.9
Samples: 193

Max nTPM: 15597.7
Min nTPM: 3124.5
Std nTPM: 2109.8
Median nTPM: 6723.2
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 15597.7
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 14205.9
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 12222.0
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 11825.5
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 11756.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 11747.9
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 11670.7
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 11289.6
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 11258.3
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 11236.4
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 11111.7
GTEX-183WM-1926-SM-72D5F 70-79 years, female 10664.7
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 10616.8
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 10448.6
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 9977.6
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 9923.3
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 9741.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 9663.7
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 9513.0
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 9313.3
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 9307.6
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 9249.6
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 9074.9
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 9048.9
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 9019.2
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 9019.1
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 8895.7
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 8808.0
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 8758.7
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 8742.4
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 8689.9
GTEX-RU72-2226-SM-46MUE 50-59 years, female 8684.1
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 8623.8
GTEX-15EOM-1526-SM-68723 20-29 years, female 8561.0
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 8534.3
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 8532.3
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 8520.9
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 8432.1
GTEX-QVJO-3126-SM-COH22 60-69 years, female 8396.9
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 8373.4
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 8359.6
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 8285.6
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 8277.6
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 8207.9
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 8202.2
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 8194.8
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 8165.9
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 8115.3
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 8112.5
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 8050.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 8046.9
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 7950.5
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 7941.6
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 7912.0
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 7900.4
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 7880.8
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 7795.2
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 7750.3
GTEX-11I78-1926-SM-59878 50-59 years, female 7733.4
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 7721.5
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 7702.5
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 7591.5
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 7572.5
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 7520.7
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 7439.6
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 7374.8
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 7366.9
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 7301.0
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 7288.2
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 7282.6
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 7257.9
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 7248.1
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 7235.1
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 7189.7
GTEX-14BIN-1426-SM-664NI 50-59 years, female 7132.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 7118.3
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 7112.1
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 7103.5
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 7053.9
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 7038.1
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 7033.6
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 7029.3
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 7024.6
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 7017.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 6988.7
GTEX-S32W-1226-SM-4AD67 50-59 years, female 6982.7
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 6980.5
GTEX-14PKV-1226-SM-6871T 20-29 years, female 6967.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 6940.7
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 6928.0
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 6863.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 6786.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 6778.9
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 6736.2
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 6729.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 6723.8
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 6723.2
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 6713.8
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 6713.5
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 6705.4
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 6682.5
GTEX-P78B-1926-SM-3P616 40-49 years, female 6612.8
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 6516.2
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 6494.6
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 6457.9
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 6457.5
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 6430.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 6401.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 6351.5
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 6347.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 6344.5
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 6338.4
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 6324.6
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 6270.5
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 6253.5
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 6162.2
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 6151.6
GTEX-QCQG-1426-SM-48U22 50-59 years, female 6146.8
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 6145.6
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 6130.4
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 6128.6
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 6127.4
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 6065.9
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 6044.7
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 5953.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 5941.1
GTEX-R45C-2526-SM-GRR28 60-69 years, female 5936.8
GTEX-18D9A-0826-SM-718C1 30-39 years, female 5908.2
GTEX-145ME-1226-SM-5MR87 40-49 years, female 5867.4
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 5850.7
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 5815.4
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 5786.4
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 5761.7
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 5759.8
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 5749.5
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 5718.0
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 5703.5
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 5688.8
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 5543.6
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 5530.1
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 5485.6
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 5446.1
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 5442.4
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 5436.1
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 5406.2
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 5351.3
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 5332.0
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 5267.7
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 5230.7
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 5120.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 5060.0
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 5012.4
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 5007.3
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 4932.4
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 4929.5
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 4810.3
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 4790.9
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 4750.8
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 4721.1
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 4719.9
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 4688.8
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 4658.1
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 4654.6
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 4647.7
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 4629.4
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 4609.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 4550.5
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 4519.2
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 4469.4
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 4442.5
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 4442.4
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 4434.5
GTEX-Q734-0726-SM-48TZP 40-49 years, female 4377.6
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 4365.7
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 4273.3
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 4256.3
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 4242.6
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 4199.8
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 4172.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 4136.2
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 4071.8
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 4019.5
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 3994.8
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 3978.6
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 3960.6
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 3930.2
GTEX-R55G-1526-SM-48FER 40-49 years, female 3919.4
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 3908.7
GTEX-14JG6-0626-SM-68716 30-39 years, female 3838.5
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 3683.8
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 3466.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 3261.7
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 3124.5
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

107.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 107.9
FF:10020-101D2 47,75,84 years, female 107.9

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