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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PMP2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:101.9 nTPM
GTEx:170.5 nTPM
FANTOM5:330.6 Scaled Tags Per Million
Macaque:30.0 nTPM
Pig:3.9 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.9
Sample id Sample description nTPM
Putamen
nTPM: 101.9
2482 Female, age 94, left hemisphere 143.6
2489 Female, age 72, unknown 134.1
1829 Male, age 74, unknown 108.0
2647 Male, age 75, left hemisphere 83.9
2466 Female, age 79, unknown 83.1
1937 Female, age 91, right hemisphere 80.9
1838 Male, age 80, right hemisphere 79.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 170.5
Samples: 254

Max nTPM: 432.5
Min nTPM: 43.3
Std nTPM: 80.0
Median nTPM: 158.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 432.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 420.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 418.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 395.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 383.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 383.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 379.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 362.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 339.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 331.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 330.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 314.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 314.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 313.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 309.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 308.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 303.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 302.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 300.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 299.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 292.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 291.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 289.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 288.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 287.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 287.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 286.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 277.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 276.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 276.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 275.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 275.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 274.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 270.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 267.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 266.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 262.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 262.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 256.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 255.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 252.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 251.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 250.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 249.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 249.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 243.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 240.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 240.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 237.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 236.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 235.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 233.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 232.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 231.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 229.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 227.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 226.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 224.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 223.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 223.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 221.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 221.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 221.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 218.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 218.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 217.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 216.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 214.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 214.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 212.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 207.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 206.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 205.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 203.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 201.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 200.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 200.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 198.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 197.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 195.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 194.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 192.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 192.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 192.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 192.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 192.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 191.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 190.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 189.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 187.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 186.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 186.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 184.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 183.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 183.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 183.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 183.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 182.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 182.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 181.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 179.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 177.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 176.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 176.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 175.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 175.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 174.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 174.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 172.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 172.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 172.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 171.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 171.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 168.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 168.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 168.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 166.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 166.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 165.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 163.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 163.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 162.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 162.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 162.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 161.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 161.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 159.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 156.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 155.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 155.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 154.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 153.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 152.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 151.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 150.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 149.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 147.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 147.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 145.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 144.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 144.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 144.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 142.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 140.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 140.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 138.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 135.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 135.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 134.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 130.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 129.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 129.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 129.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 129.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 128.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 128.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 127.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 127.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 127.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 127.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 126.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 126.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 126.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 126.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 126.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 125.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 124.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 122.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 122.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 121.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 121.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 121.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 119.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 118.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 118.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 117.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 117.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 117.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 117.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 116.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 116.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 114.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 113.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 113.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 112.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 112.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 112.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 110.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 110.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 109.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 109.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 107.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 106.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 106.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 105.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 104.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 103.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 103.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 101.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 101.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 100.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 99.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 99.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 99.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 99.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 98.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 96.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 96.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 95.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 95.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 93.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 92.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 92.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 92.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 92.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 91.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 91.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 91.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 90.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 90.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 88.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 87.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 85.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 85.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 83.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 83.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 83.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 82.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 82.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 80.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 79.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 78.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 78.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 77.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 77.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 75.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 75.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 74.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 73.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 73.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 69.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 68.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 67.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 67.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 63.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 62.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 62.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 61.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 54.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 52.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 52.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 47.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 43.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

330.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 330.6
FF:10176-103C5 60 years, female 330.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.0
Macaque sample Sample description nTPM
Putamen
nTPM: 30.0
Samples: 2

Max nTPM: 40.1
Min nTPM: 19.9
Sample A 19.9
Sample B 40.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.9
Pig sample Sample description nTPM
Putamen
nTPM: 3.9
Samples: 3

Max nTPM: 5.9
Min nTPM: 2.8
Sample B Female 2.8
Sample C Male 3.1
Sample D Male 5.9

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