HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:349.0 nTPM
HPA Brain:122.0 nTPM
GTEx:349.0 nTPM
FANTOM5:382.3 Scaled Tags Per Million
Pig:148.6 nTPM
Mouse:576.8 nTPM
Allen mouse:9.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042768
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 122.0
Sample id Sample description nTPM
Hippocampus
nTPM: 112.8
2529 Female, age 94, left hemisphere 155.4
1898 Male, age 80, left hemisphere 133.1
2621 Female, age 67, right hemisphere 124.3
1855 Male, age 76, left hemisphere 94.3
1911 Female, age 85, right hemisphere 89.0
2148 Female, age 91, left hemisphere 80.5
Dentate gyrus
nTPM: 88.6
2010 Male, age 76, both hemispheres 100.2
2530 Female, age 94, left hemisphere 97.3
2246 Female, age 85, both hemispheres 96.5
2531 Female, age 67, both hemispheres 91.0
1927 Female, age 91, both hemispheres 89.8
2528 Male, age 74, both hemispheres 57.0
Entorhinal gyrus
nTPM: 101.2
2764 Male, age 80, right hemisphere 117.0
1938 Female, age 85, left hemisphere 111.6
1787 Male, age 76, left hemisphere 108.3
2117 Female, age 91, right hemisphere 93.9
2613 Female, age 94, left hemisphere 88.4
2686 Male, age 75, right hemisphere 88.2
Hippocampus, CA1
nTPM: 100.7
2749 Male, age 80, left hemisphere 143.7
2527 Male, age 74, both hemispheres 116.3
1873 Female, age 85, both hemispheres 101.1
2045 Male, age 76, both hemispheres 76.6
2082 Female, age 91, right hemisphere 65.8
Hippocampus, CA2
nTPM: 103.9
1892 Male, age 76, both hemispheres 131.6
2437 Female, age 94, left hemisphere 130.1
1963 Male, age 80, left hemisphere 116.0
1940 Female, age 85, left hemisphere 93.5
2249 Male, age 74, both hemispheres 79.8
2113 Female, age 91, right hemisphere 72.5
Hippocampus, CA3
nTPM: 93.7
1867 Male, age 76, both hemispheres 118.6
1891 Female, age 85, both hemispheres 106.9
2137 Male, age 80, left hemisphere 105.3
2861 Female, age 67, both hemispheres 84.2
2436 Male, age 74, both hemispheres 79.6
2620 Female, age 94, left hemisphere 67.5
Parahippocampal cortex
nTPM: 109.2
2250 Female, age 67, right hemisphere 139.0
1850 Male, age 80, both hemispheres 133.0
2245 Female, age 91, both hemispheres 130.9
1933 Female, age 85, both hemispheres 119.6
1990 Female, age 91, right hemisphere 111.1
2532 Female, age 72, left hemisphere 103.0
2018 Male, age 76, both hemispheres 101.7
2622 Female, age 67, right hemisphere 90.6
2692 Male, age 74, both hemispheres 84.7
2693 Female, age 94, both hemispheres 77.9
Perirhinal gyrus
nTPM: 122.0
1847 Female, age 91, left hemisphere 144.0
1794 Male, age 80, right hemisphere 136.3
1841 Female, age 85, right hemisphere 121.9
2521 Female, age 94, right hemisphere 114.2
2848 Male, age 76, right hemisphere 93.7
Subiculum
nTPM: 108.7
2438 Female, age 94, left hemisphere 153.8
1977 Female, age 85, both hemispheres 125.2
1901 Male, age 80, both hemispheres 123.6
2619 Male, age 74, both hemispheres 102.1
2042 Male, age 76, both hemispheres 89.5
2729 Female, age 91, right hemisphere 58.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 349.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 349.0
Samples: 255

Max nTPM: 1203.8
Min nTPM: 126.0
Std nTPM: 124.0
Median nTPM: 325.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1203.8
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 906.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 876.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 714.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 644.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 642.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 631.5
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 617.6
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 617.0
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 595.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 573.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 382.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 382.3
FF:10169-103B7 60 years, female 450.7
FF:10153-102I9 76 years, female 313.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 148.6
Pig sample Sample description nTPM
Subiculum
nTPM: 116.5
Samples: 4

Max nTPM: 156.4
Min nTPM: 100.5
Sample A Female 156.4
Sample B Female 104.4
Sample C Male 104.7
Sample D Male 100.5
Dorsal hippocampus
nTPM: 148.7
Samples: 4

Max nTPM: 191.3
Min nTPM: 111.8
Sample A Female 191.3
Sample B Female 123.2
Sample C Male 168.3
Sample D Male 111.8
Entorhinal cortex
nTPM: 136.6
Samples: 4

Max nTPM: 169.6
Min nTPM: 114.3
Sample A Female 141.5
Sample B Female 169.6
Sample C Male 121.0
Sample D Male 114.3
Ventral hippocampus
nTPM: 127.6
Samples: 4

Max nTPM: 146.9
Min nTPM: 96.7
Sample A Female 134.2
Sample B Female 96.7
Sample C Male 146.9
Sample D Male 132.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 576.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 576.8
Samples: 4

Max nTPM: 600.4
Min nTPM: 528.6
Sample A Male 581.4
Sample B Male 596.7
Sample C Female 600.4
Sample D Female 528.6
Hippocampal formation
nTPM: 571.3
Samples: 4

Max nTPM: 645.2
Min nTPM: 524.8
Sample A Male 645.2
Sample B Male 524.8
Sample C Female 547.3
Sample D Female 567.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
68631911 Antisense, RP_050125_01_C12, Mouse strain C57BL/6J (56 days, male) 9.2

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