On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.5
Male, age 74
Urinary bladder sample 264 nTPM: 0.4
Cell types%
Urothelial cells:
5
Smooth muscle cells:
60
Fibroblasts:
20
Endothelial cells:
10
Other cell types:
5
Male, age 80
Urinary bladder sample 265 nTPM: 0.3
Cell types%
Urothelial cells:
10
Smooth muscle cells:
45
Fibroblasts:
15
Endothelial cells:
10
Other cell types:
20
Female, age 79
Urinary bladder sample 1597 nTPM: 0.6
Male, age 52
Urinary bladder sample 1598 nTPM: 0.6
URINARY BLADDER - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1.6
GTEx sample id
Sample description
nTPM
Bladder Average nTPM: 1.6
Samples: 77
Max nTPM: 3.5
Min nTPM: 0.6
Std nTPM: 0.5
Median nTPM: 1.6
GTEX-NPJ8-1126-SM-GNTAI
40-49 years, male
3.5
GTEX-RWSA-2126-SM-H7OG7
40-49 years, male
3.1
GTEX-T2IS-2526-SM-GRR23
20-29 years, female
3.0
GTEX-QXCU-2226-SM-GPI87
50-59 years, male
2.9
GTEX-QEG5-2326-SM-GRR2Z
20-29 years, male
2.7
GTEX-QDVN-1426-SM-GPRWL
50-59 years, male
2.6
GTEX-PLZ5-1326-SM-GQ1C2
50-59 years, male
2.5
GTEX-QDVJ-1526-SM-GPI84
50-59 years, male
2.5
GTEX-T6MN-2226-SM-EVYAM
50-59 years, male
2.4
GTEX-OIZF-1926-SM-7PBZS
60-69 years, male
2.1
GTEX-QEG4-2126-SM-GQ1CE
30-39 years, male
2.1
GTEX-RNOR-2126-SM-EXURR
50-59 years, female
2.1
GTEX-QMRM-1326-SM-HAUYS
50-59 years, male
2.0
GTEX-SNMC-0826-SM-4DM66
20-29 years, male
2.0
GTEX-SNOS-0526-SM-4DM54
40-49 years, male
2.0
GTEX-OOBK-1926-SM-HAUZL
40-49 years, male
1.9
GTEX-PW2O-1026-SM-GPRWA
20-29 years, male
1.9
GTEX-OIZH-1926-SM-GPRXO
50-59 years, male
1.8
GTEX-P44H-2226-SM-E9U4P
40-49 years, male
1.8
GTEX-Q2AH-1326-SM-GPRWF
40-49 years, male
1.8
GTEX-QEL4-1826-SM-EZ6KU
50-59 years, male
1.8
GTEX-RUSQ-1326-SM-GQ1EA
50-59 years, male
1.8
GTEX-SUCS-1226-SM-GPI9A
70-79 years, male
1.8
GTEX-U3ZH-0826-SM-H6Q7I
30-39 years, male
1.8
GTEX-N7MS-2126-SM-GRR2X
60-69 years, male
1.7
GTEX-OHPL-1926-SM-HAV18
60-69 years, female
1.7
GTEX-QV44-1426-SM-GPI8D
50-59 years, male
1.7
GTEX-R53T-1426-SM-H7OG3
50-59 years, female
1.7
GTEX-S33H-1926-SM-EYYVH
30-39 years, male
1.7
GTEX-T5JW-1026-SM-EZ6LR
20-29 years, female
1.7
GTEX-T6MO-0926-SM-GPRWN
40-49 years, female
1.7
GTEX-OXRK-1926-SM-GRR1N
50-59 years, female
1.6
GTEX-P4QS-1926-SM-GQ1BY
60-69 years, male
1.6
GTEX-P78B-2126-SM-GQ1C3
40-49 years, female
1.6
GTEX-PX3G-1926-SM-GQ1ED
20-29 years, female
1.6
GTEX-RN64-2426-SM-EZ6L2
50-59 years, male
1.6
GTEX-T5JC-1126-SM-GPIA1
20-29 years, male
1.6
GTEX-U3ZN-1226-SM-4DXUD
30-39 years, female
1.6
GTEX-U4B1-1226-SM-4DXT7
40-49 years, male
1.6
GTEX-P4QT-1926-SM-HAUYQ
50-59 years, female
1.5
GTEX-POMQ-0926-SM-H6Q6H
20-29 years, female
1.5
GTEX-S3XE-1226-SM-4AD4L
50-59 years, male
1.5
GTEX-S4UY-0926-SM-4AD6O
40-49 years, female
1.5
GTEX-TKQ2-0526-SM-GRR15
50-59 years, male
1.5
GTEX-Q734-1226-SM-GRR21
40-49 years, female
1.4
GTEX-R55G-1326-SM-HAUYU
40-49 years, female
1.4
GTEX-U3ZM-0826-SM-4DXU6
40-49 years, male
1.4
GTEX-Q2AI-1026-SM-GRR3I
40-49 years, male
1.3
GTEX-QLQW-0826-SM-H7OG2
30-39 years, male
1.3
GTEX-S32W-1126-SM-4AD5V
50-59 years, female
1.3
GTEX-T8EM-1726-SM-GPRWO
40-49 years, male
1.3
GTEX-O5YT-1926-SM-H6Q82
20-29 years, male
1.2
GTEX-PWCY-1126-SM-H7OGX
20-29 years, female
1.2
GTEX-PWN1-1926-SM-HAUZN
40-49 years, female
1.2
GTEX-QCQG-0826-SM-GPI8H
50-59 years, female
1.2
GTEX-QLQ7-1226-SM-GOQYE
60-69 years, male
1.2
GTEX-R55C-1226-SM-GOQY7
40-49 years, male
1.2
GTEX-RM2N-1026-SM-GOQY8
50-59 years, male
1.2
GTEX-S7SF-1126-SM-GQ1CH
20-29 years, female
1.2
GTEX-S95S-0626-SM-EZ6L8
60-69 years, male
1.2
GTEX-N7MT-1826-SM-GQ1C9
60-69 years, female
1.1
GTEX-OHPM-1926-SM-H7OG1
50-59 years, male
1.1
GTEX-OOBJ-1926-SM-GRR1P
60-69 years, male
1.1
GTEX-QDT8-2826-SM-GOQYY
30-39 years, female
1.1
GTEX-QV31-0926-SM-GQ1C6
30-39 years, male
1.1
GTEX-S4Q7-0926-SM-4AD5D
20-29 years, male
1.1
GTEX-TMMY-1526-SM-4DXST
40-49 years, female
1.1
GTEX-OIZI-1926-SM-H7OGY
40-49 years, male
1.0
GTEX-P4PP-1926-SM-HAUZM
30-39 years, female
1.0
GTEX-PLZ6-1026-SM-GQ1C8
30-39 years, male
1.0
GTEX-SE5C-1026-SM-4BRUG
40-49 years, female
1.0
GTEX-P4PQ-1926-SM-GRR14
60-69 years, male
0.9
GTEX-REY6-2026-SM-GPRYL
60-69 years, male
0.9
GTEX-R45C-2426-SM-HL11G
60-69 years, female
0.8
GTEX-OHPK-1926-SM-H7OF2
50-59 years, female
0.6
GTEX-RWS6-1426-SM-GPRWQ
60-69 years, female
0.6
GTEX-S4P3-0826-SM-H7OF3
50-59 years, female
0.6
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URINARY BLADDER - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
15.6
Pig sample
Sample description
nTPM
Urinary bladder nTPM: 15.6
Samples: 4
Max nTPM: 19.9
Min nTPM: 11.2
Sample A
Female
13.6
Sample B
Female
19.9
Sample C
Male
17.7
Sample D
Male
11.2
URINARY BLADDER - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
6.1
Mouse sample
Sample description
nTPM
Urinary bladder nTPM: 6.1
Samples: 4
Max nTPM: 6.4
Min nTPM: 5.3
Sample D
5.3
Sample A
6.4
Sample B
6.2
Sample C
6.3
URINARY BLADDER - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.4
Rat sample
Sample description
nTPM
Urinary bladder nTPM: 11.4
Samples: 4
Max nTPM: 12.0
Min nTPM: 10.5
Sample A
12.0
Sample A
11.9
Sample A
10.5
Sample A
11.3
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The Human Protein Atlas project is funded
