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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
113.5
nTPM
HPA Brain:
498.1
nTPM
GTEx:
113.5
nTPM
FANTOM5:
394.3
Scaled Tags Per Million
Pig:
305.7
nTPM
Mouse:
212.7
nTPM
Allen mouse:
10.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
498.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 319.3
2586
Male, age 75, left hemisphere
537.4
2828
Female, age 72, unknown
428.4
1827
Male, age 72, unknown
377.1
1870
Female, age 42, unknown
322.1
2666
Male, age 74, left hemisphere
301.0
2411
Female, age 72, unknown
289.5
1833
Male, age 53, unknown
281.0
1830
Male, age 51, unknown
238.5
2219
Male, age 76, both hemispheres
234.0
2019
Male, age 18, unknown
184.5
Dorsal raphe nucleus nTPM: 419.9
2016
Female, age 72, unknown
489.8
2298
Female, age 72, unknown
463.3
2047
Male, age 72, unknown
459.9
1828
Male, age 53, unknown
416.3
2750
Male, age 76, both hemispheres
270.3
Inferior colliculus nTPM: 427.3
1848
Female, age 42, unknown
495.5
2849
Male, age 72, unknown
450.3
2097
Female, age 72, unknown
396.0
1890
Male, age 53, unknown
367.3
Median raphe nucleus nTPM: 314.1
2220
Male, age 76, midline
314.1
Periaquaductal grey, anterior nTPM: 453.5
1795
Male, age 51, unknown
466.1
1947
Male, age 18, unknown
456.2
2502
Female, age 75, unknown
438.2
Periaquaductal grey, dorsal nTPM: 498.1
1840
Male, age 53, unknown
644.0
2850
Male, age 76, both hemispheres
532.9
2464
Female, age 72, unknown
442.8
1831
Male, age 72, unknown
372.9
Periaquaductal grey, lateral nTPM: 425.9
2053
Male, age 18, unknown
512.8
2140
Male, age 76, both hemispheres
475.4
2272
Male, age 74, both hemispheres
289.5
Pretectal area nTPM: 391.9
2667
Female, age 75, unknown
464.0
1816
Male, age 51, unknown
434.0
1944
Female, age 72, unknown
431.3
2224
Female, age 72, unknown
427.5
2825
Male, age 18, unknown
425.9
2273
Male, age 74, both hemispheres
415.6
1817
Female, age 42, unknown
409.6
1815
Male, age 53, unknown
362.6
2407
Male, age 75, both hemispheres
345.2
2316
Male, age 76, right hemisphere
328.1
2007
Male, age 72, unknown
267.0
Red nucleus nTPM: 282.1
1954
Female, age 42, unknown
336.0
2725
Female, age 75, unknown
333.1
2503
Female, age 72, unknown
326.1
1821
Female, age 72, unknown
313.0
2227
Male, age 72, unknown
301.0
2769
Male, age 72, unknown
300.9
2588
Male, age 74, left hemisphere
284.1
1904
Male, age 53, unknown
269.1
1865
Male, age 51, unknown
261.5
2823
Male, age 76, right hemisphere
238.6
2584
Male, age 75, left hemisphere
232.7
2785
Male, age 18, unknown
188.9
Substantia nigra nTPM: 341.5
2699
Male, age 18, unknown
520.7
1916
Female, age 42, unknown
414.9
1889
Female, age 72, unknown
362.1
2241
Male, age 72, unknown
346.3
1851
Male, age 51, unknown
329.2
2665
Male, age 74, both hemispheres
323.3
2583
Male, age 75, right hemisphere
285.6
1941
Male, age 53, unknown
283.7
2409
Female, age 72, unknown
275.3
2590
Female, age 75, unknown
274.3
Superior colliculus nTPM: 380.7
2664
Male, age 75, both hemispheres
506.8
2261
Male, age 18, unknown
427.2
1796
Male, age 53, unknown
412.9
2087
Female, age 72, unknown
412.7
1995
Male, age 72, unknown
401.5
1839
Male, age 51, unknown
395.0
2587
Male, age 74, left hemisphere
340.0
1913
Female, age 42, unknown
334.3
2668
Female, age 75, unknown
329.9
1895
Male, age 76, right hemisphere
246.6
Ventral tegmental area nTPM: 327.6
1942
Male, age 51, unknown
371.6
2021
Male, age 53, unknown
362.2
2410
Female, age 72, unknown
327.7
1915
Female, age 42, unknown
322.2
2218
Male, age 76, both hemispheres
304.4
2223
Female, age 72, unknown
277.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
113.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 113.5
Samples: 139
Max nTPM: 404.4
Min nTPM: 19.2
Std nTPM: 64.6
Median nTPM: 101.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
404.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
344.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
290.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
284.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
266.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
259.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
229.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
226.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
223.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
223.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
215.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
212.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
200.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
195.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
194.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
191.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
189.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
188.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
185.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
184.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
183.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
173.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
170.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
166.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
164.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
163.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
161.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
161.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
159.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
156.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
154.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
154.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
153.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
145.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
145.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
139.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
135.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
134.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
134.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
130.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
128.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
128.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
126.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
125.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
123.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
119.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
118.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
117.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
114.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
113.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
113.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
112.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
111.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
110.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
109.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
109.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
108.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
108.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
107.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
107.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
107.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
105.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
103.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
103.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
103.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
103.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
102.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
102.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
102.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
101.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
98.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
96.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
96.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
95.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
94.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
93.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
93.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
92.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
91.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
91.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
89.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
85.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
84.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
84.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
84.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
84.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
84.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
82.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
82.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
82.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
82.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
81.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
80.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
80.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
78.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
76.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
75.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
75.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
74.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
74.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
74.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
71.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
71.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
70.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
70.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
70.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
69.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
68.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
68.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
66.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
65.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
65.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
64.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
64.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
63.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
62.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
59.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
59.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
58.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
50.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
50.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
50.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
47.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
47.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
46.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
46.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
46.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
43.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
43.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
43.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
40.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
37.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
36.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
36.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
34.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
26.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
23.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
22.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
19.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
212.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 212.8
Samples: 4
Max nTPM: 223.2
Min nTPM: 203.7
Sample A
Male
203.7
Sample B
Male
208.8
Sample C
Female
215.3
Sample D
Female
223.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.