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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
High
Neuronal cells:
Medium
Neuronal projections:
Not detected
Synapses:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
123.0
nTPM
HPA Brain:
392.8
nTPM
GTEx:
123.0
nTPM
FANTOM5:
961.9
Scaled Tags Per Million
Pig:
315.8
nTPM
Mouse:
205.2
nTPM
Allen mouse:
13.3
Expression energy
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA074873
Glial cells
High
Neuronal cells
Not detected
Neuronal projections
Not detected
Synapses
Not detected
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA074873
Antibody CAB010346
Glial cells
Low
Not detected
Neuronal cells
Not detected
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
392.8
Sample id
Sample description
nTPM
Hippocampus nTPM: 392.8
2529
Female, age 94, left hemisphere
476.4
2148
Female, age 91, left hemisphere
448.9
1911
Female, age 85, right hemisphere
397.2
1898
Male, age 80, left hemisphere
395.7
1855
Male, age 76, left hemisphere
336.2
2621
Female, age 67, right hemisphere
302.5
Dentate gyrus nTPM: 308.1
2528
Male, age 74, both hemispheres
432.0
2246
Female, age 85, both hemispheres
359.6
1927
Female, age 91, both hemispheres
328.0
2010
Male, age 76, both hemispheres
266.1
2530
Female, age 94, left hemisphere
259.8
2531
Female, age 67, both hemispheres
202.9
Entorhinal gyrus nTPM: 318.3
2117
Female, age 91, right hemisphere
489.5
1938
Female, age 85, left hemisphere
380.9
1787
Male, age 76, left hemisphere
315.9
2764
Male, age 80, right hemisphere
272.0
2686
Male, age 75, right hemisphere
233.9
2613
Female, age 94, left hemisphere
217.5
Hippocampus, CA1 nTPM: 346.1
2527
Male, age 74, both hemispheres
487.8
1873
Female, age 85, both hemispheres
397.0
2082
Female, age 91, right hemisphere
320.9
2749
Male, age 80, left hemisphere
299.6
2045
Male, age 76, both hemispheres
225.2
Hippocampus, CA2 nTPM: 317.3
2113
Female, age 91, right hemisphere
385.1
2249
Male, age 74, both hemispheres
383.9
1963
Male, age 80, left hemisphere
327.9
1940
Female, age 85, left hemisphere
309.6
2437
Female, age 94, left hemisphere
274.6
1892
Male, age 76, both hemispheres
223.0
Hippocampus, CA3 nTPM: 316.8
1891
Female, age 85, both hemispheres
376.6
2436
Male, age 74, both hemispheres
375.1
2620
Female, age 94, left hemisphere
319.1
2861
Female, age 67, both hemispheres
301.1
2137
Male, age 80, left hemisphere
292.3
1867
Male, age 76, both hemispheres
237.0
Parahippocampal cortex nTPM: 329.3
2692
Male, age 74, both hemispheres
421.3
2250
Female, age 67, right hemisphere
400.4
2622
Female, age 67, right hemisphere
371.0
1933
Female, age 85, both hemispheres
364.7
1850
Male, age 80, both hemispheres
341.6
1990
Female, age 91, right hemisphere
330.5
2245
Female, age 91, both hemispheres
324.3
2693
Female, age 94, both hemispheres
279.3
2532
Female, age 72, left hemisphere
235.4
2018
Male, age 76, both hemispheres
224.9
Perirhinal gyrus nTPM: 325.5
1794
Male, age 80, right hemisphere
360.4
1847
Female, age 91, left hemisphere
352.4
1841
Female, age 85, right hemisphere
345.8
2521
Female, age 94, right hemisphere
321.8
2848
Male, age 76, right hemisphere
247.3
Subiculum nTPM: 360.5
2729
Female, age 91, right hemisphere
523.7
2619
Male, age 74, both hemispheres
479.9
2438
Female, age 94, left hemisphere
322.4
1977
Female, age 85, both hemispheres
311.4
1901
Male, age 80, both hemispheres
276.4
2042
Male, age 76, both hemispheres
249.5
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
123.0
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 123.0
Samples: 197
Max nTPM: 348.9
Min nTPM: 25.0
Std nTPM: 64.3
Median nTPM: 107.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
348.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
335.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
311.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
300.8
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
300.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
294.1
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
292.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
289.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
256.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
249.0
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
247.9
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
239.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
234.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
228.9
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
217.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
216.2
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
212.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
212.2
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
211.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
209.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
208.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
208.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
204.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
203.9
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
202.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
202.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
200.8
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
196.6
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
196.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
196.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
195.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
194.4
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
191.3
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
176.1
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
175.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
174.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
171.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
171.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
168.6
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
165.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
165.2
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
164.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
159.4
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
159.0
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
157.5
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
157.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
155.6
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
154.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
153.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
153.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
153.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
152.9
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
151.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
151.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
150.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
149.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
149.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
148.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
146.1
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
145.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
144.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
143.5
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
143.1
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
142.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
141.8
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
140.0
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
138.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
137.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
137.1
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
135.6
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
134.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
133.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
133.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
132.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
132.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
130.7
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
130.6
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
130.4
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
130.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
128.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
126.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
125.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
124.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
121.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
120.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
119.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
119.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
115.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
114.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
114.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
113.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
112.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
111.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
110.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
110.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
109.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
108.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
108.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
107.1
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
105.5
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
104.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
104.7
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
104.7
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
104.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
104.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
104.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
104.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
103.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
102.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
101.8
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
100.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
98.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
98.5
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
98.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
98.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
98.0
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
97.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
94.2
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
93.9
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
92.9
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
92.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
91.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
91.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
90.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
90.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
89.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
89.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
89.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
88.9
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
88.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
88.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
88.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
87.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
86.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
85.6
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
85.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
83.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
83.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
83.3
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
83.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
82.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
80.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
80.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
80.2
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
78.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
78.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
77.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
76.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
76.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
71.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
71.4
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
70.8
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
70.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
70.4
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
70.2
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
67.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
66.9
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
66.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
66.1
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
66.0
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
65.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
64.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
64.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
64.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
63.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
63.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
63.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
63.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
62.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
62.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
61.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
61.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
60.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
59.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
59.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
54.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
54.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
54.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
53.6
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
53.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
53.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
49.9
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
49.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
48.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
47.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
44.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
41.4
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
41.2
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
40.6
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
40.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
37.7
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
36.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
35.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
33.3
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
29.8
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
26.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
25.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
205.2
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 205.2
Samples: 4
Max nTPM: 242.5
Min nTPM: 177.3
Sample A
Male
199.0
Sample B
Male
177.3
Sample C
Female
202.0
Sample D
Female
242.5
Hippocampal formation nTPM: 159.3
Samples: 4
Max nTPM: 172.8
Min nTPM: 146.9
Sample A
Male
163.2
Sample B
Male
146.9
Sample C
Female
154.2
Sample D
Female
172.8
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.