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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:401.4 nTPM
HPA:308.3 nTPM
GTEx:401.4 nTPM
FANTOM5:620.8 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA026810
Ovarian stroma cells Low



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

308.3
overview
Female, age 64
Ovary sample 192
nTPM: 253
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 302.6
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 151.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 377.9
N/A
Female, age 16
Ovary sample 3663
nTPM: 704.6
N/A
Female, age 20
Ovary sample 3664
nTPM: 210.6
N/A
Female, age 32
Ovary sample 3665
nTPM: 157.8

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

401.4
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 401.4
Samples: 193

Max nTPM: 2067.3
Min nTPM: 65.8
Std nTPM: 253.0
Median nTPM: 363.6
GTEX-R55G-1526-SM-48FER 40-49 years, female 2067.3
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 1402.4
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 1230.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1012.2
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 986.3
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 971.5
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 948.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 877.2
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 876.6
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 854.9
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 814.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 812.3
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 807.2
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 738.3
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 728.2
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 709.3
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 699.7
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 697.9
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 695.5
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 680.5
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 677.0
GTEX-QVJO-3126-SM-COH22 60-69 years, female 666.2
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 666.1
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 659.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 653.4
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 641.2
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 636.6
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 620.0
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 619.0
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 615.2
GTEX-QCQG-1426-SM-48U22 50-59 years, female 613.7
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 607.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 600.7
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 596.4
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 583.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 579.5
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 576.5
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 576.1
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 566.1
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 564.6
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 543.5
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 536.4
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 534.2
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 531.6
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 529.1
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 520.0
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 520.0
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 516.6
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 505.9
GTEX-13SLX-2426-SM-664OM 50-59 years, female 504.5
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 502.5
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 500.5
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 498.4
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 487.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 485.0
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 470.0
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 468.0
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 467.8
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 465.3
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 462.7
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 455.5
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 448.1
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 445.7
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 445.1
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 441.6
GTEX-R45C-2526-SM-GRR28 60-69 years, female 438.1
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 437.8
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 431.7
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 428.4
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 428.2
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 421.3
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 416.5
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 412.4
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 405.7
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 404.8
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 403.2
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 401.6
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 399.5
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 399.0
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 394.5
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 393.7
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 392.7
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 391.0
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 390.7
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 385.9
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 380.0
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 378.8
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 377.3
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 372.6
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 371.0
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 367.9
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 367.5
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 365.8
GTEX-14PKV-1226-SM-6871T 20-29 years, female 365.5
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 365.4
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 364.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 363.6
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 361.7
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 360.6
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 356.1
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 351.6
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 344.4
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 344.1
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 343.8
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 342.2
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 335.8
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 326.5
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 322.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 319.3
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 318.6
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 318.5
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 315.4
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 314.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 313.1
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 306.1
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 304.1
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 299.4
GTEX-145ME-1226-SM-5MR87 40-49 years, female 298.4
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 296.3
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 285.5
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 284.1
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 282.3
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 281.8
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 281.7
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 280.6
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 279.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 279.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 273.0
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 270.8
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 263.1
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 259.4
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 258.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 256.4
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 256.3
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 255.6
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 255.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 251.0
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 247.4
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 245.3
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 238.7
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 238.5
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 238.0
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 233.4
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 230.3
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 227.0
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 225.2
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 222.6
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 222.1
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 221.8
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 219.8
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 212.0
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 211.7
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 211.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 210.4
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 209.9
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 209.2
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 203.7
GTEX-11I78-1926-SM-59878 50-59 years, female 202.8
GTEX-18D9A-0826-SM-718C1 30-39 years, female 197.2
GTEX-P78B-1926-SM-3P616 40-49 years, female 194.3
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 186.1
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 181.9
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 181.9
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 180.3
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 176.8
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 176.0
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 174.4
GTEX-14BIN-1426-SM-664NI 50-59 years, female 167.2
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 165.4
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 160.7
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 153.4
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 147.5
GTEX-S32W-1226-SM-4AD67 50-59 years, female 146.9
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 144.1
GTEX-15EOM-1526-SM-68723 20-29 years, female 144.0
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 141.7
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 141.6
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 140.9
GTEX-14JG6-0626-SM-68716 30-39 years, female 138.0
GTEX-Q734-0726-SM-48TZP 40-49 years, female 131.5
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 126.1
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 121.0
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 118.4
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 116.6
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 112.0
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 109.6
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 106.7
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 102.4
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 98.3
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 95.5
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 84.4
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 83.0
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 65.8
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

620.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 620.8
FF:10020-101D2 47,75,84 years, female 620.8

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