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  • PIP4K2A
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:238.6 nTPM
HPA Brain:297.6 nTPM
GTEx:238.6 nTPM
FANTOM5:432.6 Scaled Tags Per Million
Pig:179.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

297.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 253.2
2048 Male, age 55, midline 291.4
1981 Female, age 72, midline 276.0
2194 Female, age 79, both hemispheres 265.0
2816 Male, age 47, midline 249.1
2565 Male, age 75, midline 184.4
Cervical spinal cord, dorsal horn
nTPM: 297.6
2296 Male, age 66, both hemispheres 464.6
2173 Female, age 72, unknown 417.1
2069 Male, age 47, both hemispheres 285.1
1877 Male, age 55, unknown 240.3
2297 Male, age 75, both hemispheres 201.3
2721 Male, age 90, both hemispheres 177.2
Cervical spinal cord, ventral horn
nTPM: 293.6
2068 Male, age 55, unknown 323.4
2820 Female, age 79, both hemispheres 312.6
2480 Male, age 75, both hemispheres 298.6
2098 Female, age 72, unknown 283.2
2809 Male, age 90, both hemispheres 272.1
2295 Male, age 66, both hemispheres 272.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

238.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 238.6
Samples: 204

Max nTPM: 548.0
Min nTPM: 70.5
Std nTPM: 72.0
Median nTPM: 231.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 548.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 440.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 412.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 412.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 393.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 389.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 385.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 379.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 378.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 371.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 365.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 363.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 360.9
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 358.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 345.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 337.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 335.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 329.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 326.4
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 324.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 324.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 322.1
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 322.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 321.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 320.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 318.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 316.8
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 315.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 313.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 310.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 310.4
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 309.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 307.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 307.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 305.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 304.1
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 302.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 299.8
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 298.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 298.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 295.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 293.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 291.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 289.6
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 288.1
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 287.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 287.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 285.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 284.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 283.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 282.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 280.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 279.4
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 276.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 274.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 274.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 273.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 271.9
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 271.1
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 271.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 270.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 269.5
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 269.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 266.3
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 266.2
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 266.1
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 264.6
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 262.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 262.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 262.1
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 262.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 259.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 258.4
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 257.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 254.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 253.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 253.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 251.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 251.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 251.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 249.8
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 249.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 248.8
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 248.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 247.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 246.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 246.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 245.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 245.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 243.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 243.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 243.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 241.3
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 241.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 240.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 238.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 237.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 237.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 237.6
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 236.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 232.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 231.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 230.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 230.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 230.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 228.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 228.8
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 228.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 227.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 226.8
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 226.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 226.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 226.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 225.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 225.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 225.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 222.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 222.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 222.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 222.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 221.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 218.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 217.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 217.7
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 215.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 215.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 214.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 214.6
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 214.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 214.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 213.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 212.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 211.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 211.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 211.3
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 210.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 210.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 210.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 208.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 207.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 206.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 205.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 204.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 203.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 201.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 201.5
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 201.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 200.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 198.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 195.9
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 195.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 195.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 193.0
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 191.3
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 190.9
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 190.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 188.6
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 187.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 185.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 183.6
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 182.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 182.8
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 182.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 181.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 181.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 177.1
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 176.5
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 175.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 174.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 169.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 169.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 166.8
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 166.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 166.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 163.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 161.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 161.0
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 158.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 157.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 156.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 153.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 152.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 152.2
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 150.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 146.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 146.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 143.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 142.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 141.1
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 139.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 138.9
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 135.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 131.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 130.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 126.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 120.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 111.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 107.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 106.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 100.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 99.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 88.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 86.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 70.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

432.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 432.6
FF:10181-103D1 60 years, female 471.0
FF:10159-103A6 76 years, female 394.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

179.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 150.9
Samples: 4

Max nTPM: 175.0
Min nTPM: 116.5
Sample A Female 156.0
Sample B Female 156.2
Sample C Male 116.5
Sample D Male 175.0
Ventral spinal cord
nTPM: 179.5
Samples: 4

Max nTPM: 236.5
Min nTPM: 132.5
Sample A Female 179.6
Sample B Female 169.4
Sample C Male 132.5
Sample D Male 236.5

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