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  • TISSUE

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  • PIP4K2A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:75.9 nTPM
HPA Brain:345.0 nTPM
GTEx:75.9 nTPM
Pig:56.6 nTPM
Mouse:54.4 nTPM
Allen mouse:2.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

345.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 67.0
2226 Male, age 75, left hemisphere 92.2
1961 Female, age 42, unknown 41.9
Dorsomedial nucleus
nTPM: 125.3
2017 Female, age 42, unknown 190.9
1989 Male, age 62, unknown 126.5
2041 Female, age 72, unknown 58.7
Lateral hypothalamic area
nTPM: 185.9
2228 Male, age 66, unknown 224.6
2271 Male, age 75, both hemispheres 214.9
1791 Male, age 80, right hemisphere 157.0
2412 Male, age 62, unknown 147.3
Mammillary body
nTPM: 345.0
1945 Male, age 80, right hemisphere 454.4
1948 Female, age 72, unknown 386.7
1834 Female, age 42, unknown 360.9
2413 Male, age 66, unknown 264.7
1923 Female, age 72, unknown 258.2
Paraventricular nucleus
nTPM: 339.2
2700 Male, age 62, unknown 339.2
Preoptic area
nTPM: 221.7
2414 Female, age 72, unknown 380.4
1861 Female, age 42, unknown 198.0
1907 Male, age 80, right hemisphere 86.8
Supraoptic nucleus
nTPM: 204.4
2043 Male, age 62, unknown 272.2
1894 Female, age 72, unknown 189.9
2835 Female, age 72, unknown 151.3
Ventromedial nucleus
nTPM: 62.4
1982 Female, age 72, unknown 68.5
1822 Female, age 42, unknown 56.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 75.9
Samples: 257

Max nTPM: 353.7
Min nTPM: 11.8
Std nTPM: 62.5
Median nTPM: 55.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 353.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 325.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 303.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 288.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 282.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 277.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 266.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 258.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 255.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 225.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 217.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 213.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 200.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 199.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 195.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 194.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 194.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 190.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 188.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 185.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 179.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 173.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 169.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 167.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 165.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 162.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 160.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 159.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 159.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 156.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 155.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 146.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 145.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 143.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 141.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 138.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 138.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 130.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 129.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 128.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 126.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 124.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 123.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 121.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 121.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 120.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 119.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 115.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 114.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 114.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 113.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 113.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 112.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 111.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 110.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 107.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 105.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 104.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 103.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 103.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 102.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 101.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 101.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 100.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 96.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 95.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 94.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 91.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 90.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 89.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 89.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 88.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 88.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 88.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 87.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 87.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 86.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 85.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 82.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 81.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 80.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 78.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 78.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 78.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 76.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 76.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 75.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 75.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 75.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 75.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 73.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 73.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 73.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 71.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 71.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 71.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 69.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 69.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 67.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 67.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 66.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 66.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 65.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 65.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 64.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 64.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 63.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 62.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 62.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 61.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 61.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 61.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 61.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 61.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 61.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 61.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 60.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 60.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 60.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 59.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 59.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 58.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 58.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 57.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 56.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 56.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 56.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 55.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 55.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 55.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 55.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 54.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 54.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 53.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 53.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 53.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 53.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 52.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 52.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 52.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 51.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 51.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 50.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 50.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 50.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 49.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 47.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 47.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 47.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 47.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 47.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 46.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 46.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 43.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 43.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 42.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 42.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 41.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 41.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 41.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 40.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 40.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 40.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 39.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 39.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 38.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 38.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 38.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 37.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 37.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 37.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 37.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 37.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 36.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 36.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 36.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 36.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 35.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 35.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 35.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 35.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 34.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 34.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 33.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 33.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 33.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 33.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 33.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 32.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 32.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 32.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 31.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 31.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 31.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 31.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 30.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 30.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 29.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 29.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 29.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 28.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 28.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 28.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 28.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 28.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 27.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 27.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 27.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 27.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 26.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 26.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 26.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 26.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 26.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 26.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 25.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 25.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 25.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 25.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 24.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 24.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 24.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 24.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 24.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 24.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 24.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 24.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 24.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 24.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 23.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 22.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 22.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 22.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 22.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 22.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 21.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 21.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 21.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 21.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 21.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 21.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 20.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 20.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 20.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 19.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 19.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 18.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 17.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 16.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 16.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 16.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 12.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 11.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 56.6
Samples: 4

Max nTPM: 70.6
Min nTPM: 32.1
Sample A Female 63.6
Sample B Female 70.6
Sample C Male 60.0
Sample D Male 32.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 54.4
Samples: 4

Max nTPM: 60.1
Min nTPM: 47.5
Sample A Male 47.5
Sample B Male 53.2
Sample C Female 60.1
Sample D Female 56.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.7
75146004 Antisense, RP_060220_02_B10, Mouse strain C57BL/6J (56 days, male) 4.1
564654 Antisense, RP_040826_01_B12, Mouse strain C57BL/6J (56 days, male) 1.3

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