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  • TISSUE

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  • ABCB9
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:11.9 nTPM
HPA Brain:42.5 nTPM
GTEx:11.9 nTPM
Pig:6.6 nTPM
Mouse:11.3 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 31.4
1961 Female, age 42, unknown 33.3
2226 Male, age 75, left hemisphere 29.5
Dorsomedial nucleus
nTPM: 42.5
1989 Male, age 62, unknown 51.3
2017 Female, age 42, unknown 39.5
2041 Female, age 72, unknown 36.7
Lateral hypothalamic area
nTPM: 34.0
2412 Male, age 62, unknown 41.0
1791 Male, age 80, right hemisphere 34.4
2228 Male, age 66, unknown 31.4
2271 Male, age 75, both hemispheres 29.1
Mammillary body
nTPM: 35.7
1923 Female, age 72, unknown 43.6
2413 Male, age 66, unknown 36.6
1834 Female, age 42, unknown 33.9
1945 Male, age 80, right hemisphere 32.9
1948 Female, age 72, unknown 31.2
Paraventricular nucleus
nTPM: 31.5
2700 Male, age 62, unknown 31.5
Preoptic area
nTPM: 39.2
1907 Male, age 80, right hemisphere 43.0
1861 Female, age 42, unknown 41.5
2414 Female, age 72, unknown 33.1
Supraoptic nucleus
nTPM: 35.4
1894 Female, age 72, unknown 38.9
2835 Female, age 72, unknown 37.0
2043 Male, age 62, unknown 30.4
Ventromedial nucleus
nTPM: 34.9
1982 Female, age 72, unknown 38.7
1822 Female, age 42, unknown 31.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 11.9
Samples: 257

Max nTPM: 32.3
Min nTPM: 3.5
Std nTPM: 4.3
Median nTPM: 11.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 32.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 25.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 24.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 23.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 23.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 22.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 22.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 20.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 20.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 20.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 20.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 20.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 19.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 19.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 19.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 19.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 18.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 18.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 18.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 18.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 18.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 18.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 17.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 17.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 17.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 17.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 17.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 17.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 17.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 17.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 17.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 17.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 17.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 17.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 17.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 17.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 17.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 17.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 16.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 16.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 16.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 16.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 16.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 16.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 16.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 16.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 15.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 15.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 15.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 15.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 15.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 15.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 15.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 15.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 15.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 15.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 15.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 14.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 14.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 14.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 14.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 14.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 14.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 14.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 14.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 14.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 14.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 14.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 14.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 14.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 14.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 14.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 14.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 14.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 13.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 13.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 13.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 13.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 13.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 13.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 13.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 13.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 13.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 13.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 13.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 13.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 13.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 13.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 13.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 13.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 12.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 12.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 12.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 12.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 12.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 12.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 12.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 12.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 12.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 12.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 12.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 12.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 12.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 12.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 12.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 12.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 11.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 11.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 11.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 11.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 11.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 11.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 11.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 11.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 11.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 11.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 11.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 11.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 11.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 11.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 11.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 11.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 11.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 11.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 11.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 11.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 11.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 11.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 11.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 11.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 11.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 11.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 10.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 10.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 10.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 10.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 10.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 10.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 10.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 10.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 10.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 10.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 10.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 10.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 10.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 10.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 10.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 10.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 10.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 10.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 10.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 10.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 10.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 10.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 10.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 10.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 9.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 9.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 9.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 9.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 9.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 9.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 9.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 9.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 9.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 9.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 9.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 9.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 9.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 9.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 9.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 9.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 9.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 9.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 9.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 9.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 9.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 9.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 9.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 9.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 9.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 9.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 9.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 9.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 8.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 8.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 8.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 8.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 8.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 8.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 8.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 8.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 8.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 8.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 8.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 8.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 8.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 8.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 8.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 8.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 8.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 8.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 8.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 8.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 8.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 8.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 8.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 8.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 8.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 8.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 8.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 8.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 7.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 7.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 7.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 7.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 7.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 7.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 7.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 7.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 7.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 7.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 7.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 7.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 7.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 7.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 7.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 7.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 7.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 7.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 7.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 6.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 6.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 6.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 6.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 6.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 6.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 6.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 6.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 6.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 6.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 6.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 6.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 6.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 6.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 5.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 5.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 5.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 5.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 5.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 4.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 4.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 4.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 3.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6.6
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.5
Sample A Female 6.8
Sample B Female 7.3
Sample C Male 6.8
Sample D Male 5.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 11.3
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.6
Sample A Male 11.2
Sample B Male 12.5
Sample C Female 10.6
Sample D Female 10.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.2
68798753 Antisense, RP_050217_01_C01, Mouse strain C57BL/6J (56 days, male) 1.2

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