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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • EVOLUTION

  • ITIH2
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2016.4 nTPM
HPA:2016.4 nTPM
GTEx:411.0 nTPM
FANTOM5:2038.8 Scaled Tags Per Million
Macaque:1384.0 nTPM
Pig:1232.2 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA059150
Cholangiocytes Not detected
Hepatocytes Not detected



LIVER - PROTEINTALKS DB MS
Median intensity 16978
Sample Intensity
Liver_01
33487
Liver_02
12010
Liver_03
26932
Liver_04
24653
Liver_05
21945
Liver_06
33281
Liver_07
10806
Liver_08
10936
Liver_09
9785
Liver_10
8385

LIVER - MANN MS
Median intensity 59579626
Replicate Intensity
Liver_01
65488887
Liver_02
53551097
Liver_03
59579626

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2016.4
N/A
Female, age 60
Liver sample 21
nTPM: 1021.3
overview
Male, age 54
Liver sample 23
nTPM: 1747.1
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 1627.1
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 2369.2
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 2258.1
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 2626.6
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 2395
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 1700.8
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 1935.4
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 2483.7
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

411.0
GTEx sample id Sample description nTPM
Liver
Average nTPM: 411.0
Samples: 262

Max nTPM: 1358.8
Min nTPM: 45.3
Std nTPM: 245.2
Median nTPM: 345.2
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 1358.8
GTEX-18A7A-1526-SM-72D69 50-59 years, female 1259.1
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 1155.7
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 1088.9
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 1085.6
GTEX-14JG1-1626-SM-664NH 40-49 years, male 1017.9
GTEX-14E7W-1526-SM-6871X 70-79 years, male 993.1
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 988.5
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 977.5
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 931.5
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 914.1
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 887.3
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 868.0
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 860.4
GTEX-QESD-2026-SM-447BI 20-29 years, male 860.1
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 856.6
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 852.2
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 845.9
GTEX-R53T-0326-SM-48FEC 50-59 years, female 845.9
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 843.4
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 842.9
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 836.4
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 807.0
GTEX-Q734-0326-SM-48U15 40-49 years, female 779.0
GTEX-17HHE-0126-SM-79398 50-59 years, male 774.9
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 772.8
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 770.5
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 752.9
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 738.4
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 720.9
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 714.4
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 713.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 709.5
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 706.7
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 695.3
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 694.1
GTEX-14PHX-0526-SM-664NW 50-59 years, male 691.2
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 690.8
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 683.4
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 679.2
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 674.1
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 665.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 647.9
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 645.3
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 641.3
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 637.3
GTEX-1399T-0826-SM-5IFES 60-69 years, male 637.2
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 636.6
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 623.2
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 617.6
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 612.9
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 609.2
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 600.3
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 596.3
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 592.3
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 578.9
GTEX-P78B-1326-SM-3P611 40-49 years, female 578.1
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 575.9
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 574.2
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 570.1
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 568.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 564.3
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 555.6
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 553.1
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 546.0
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 544.9
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 541.5
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 538.4
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 530.2
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 530.1
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 524.6
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 523.9
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 522.8
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 518.4
GTEX-13112-1426-SM-5EGH8 50-59 years, male 514.3
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 512.7
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 512.3
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 512.1
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 507.2
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 499.5
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 499.4
GTEX-1B932-1426-SM-793AN 40-49 years, female 492.2
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 490.1
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 486.6
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 483.4
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 481.8
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 477.6
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 475.7
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 472.5
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 466.6
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 461.8
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 459.2
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 455.6
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 455.1
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 451.1
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 449.4
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 447.3
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 445.9
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 444.1
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 442.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 442.8
GTEX-18465-1626-SM-7LG6N 50-59 years, male 442.0
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 438.0
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 432.4
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 432.1
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 429.2
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 422.6
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 416.8
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 410.4
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 403.0
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 396.1
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 394.2
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 392.8
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 381.8
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 380.0
GTEX-17F96-1226-SM-79OK2 70-79 years, male 379.5
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 378.4
GTEX-QEL4-1226-SM-447A4 50-59 years, male 377.9
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 376.6
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 374.9
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 374.0
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 369.4
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 366.9
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 363.2
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 359.4
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 359.3
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 354.6
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 351.5
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 346.9
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 346.4
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 345.8
GTEX-18A66-2026-SM-7189C 60-69 years, male 344.7
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 344.2
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 340.9
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 338.6
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 336.5
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 332.2
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 332.1
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 328.7
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 325.9
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 325.8
GTEX-11ZUS-2526-SM-59872 30-39 years, male 324.9
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 324.6
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 324.6
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 324.3
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 323.4
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 322.9
GTEX-RN64-1826-SM-48FDV 50-59 years, male 322.9
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 321.2
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 321.2
GTEX-13113-1326-SM-5GCOI 60-69 years, female 319.1
GTEX-11GSP-0626-SM-5986T 60-69 years, female 314.7
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 314.0
GTEX-YECK-1926-SM-4W21H 60-69 years, male 313.4
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 312.2
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 311.5
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 309.4
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 308.9
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 307.6
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 307.5
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 303.8
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 299.1
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 296.7
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 295.6
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 294.6
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 291.1
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 288.5
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 287.2
GTEX-S33H-1626-SM-4AD68 30-39 years, male 285.2
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 284.9
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 283.6
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 281.8
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 281.6
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 278.7
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 277.8
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 277.6
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 276.0
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 275.4
GTEX-1B933-1226-SM-731DW 50-59 years, female 270.9
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 269.2
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 268.3
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 267.8
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 265.8
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 265.7
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 262.2
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 257.9
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 250.9
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 243.3
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 242.5
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 241.2
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 240.7
GTEX-12696-0826-SM-5EGGE 60-69 years, male 235.7
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 234.6
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 234.1
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 232.3
GTEX-X261-1726-SM-4PQYT 50-59 years, male 230.5
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 227.8
GTEX-14XAO-0226-SM-68728 60-69 years, female 221.0
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 220.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 218.3
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 218.1
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 217.2
GTEX-111FC-1226-SM-HAV27 60-69 years, male 212.9
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 211.7
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 211.3
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 211.2
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 210.0
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 202.7
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 200.5
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 199.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 198.5
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 196.2
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 196.0
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 192.0
GTEX-REY6-1226-SM-48FDR 60-69 years, male 191.9
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 190.8
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 187.8
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 183.5
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 175.6
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 175.6
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 174.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 173.6
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 172.8
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 167.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 166.2
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 163.3
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 162.7
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 161.3
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 159.9
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 149.7
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 148.3
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 147.4
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 146.8
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 146.3
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 144.7
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 141.7
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 138.8
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 136.6
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 136.4
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 136.0
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 130.3
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 127.4
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 124.6
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 122.6
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 118.8
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 111.6
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 111.1
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 108.8
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 105.5
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 105.4
GTEX-O5YV-0726-SM-EV798 60-69 years, female 104.6
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 102.9
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 96.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 95.9
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 95.5
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 90.8
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 81.9
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 74.7
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 61.4
GTEX-S32W-1926-SM-4AD63 50-59 years, female 61.2
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 46.9
GTEX-14PJO-1726-SM-68719 60-69 years, male 45.3
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2038.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 2038.8
FF:10018-101C9 64,69,70 years, mixed 2038.8

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1384.0
Macaque sample Sample description nTPM
Liver
nTPM: 1383.9
Samples: 3

Max nTPM: 1672.1
Min nTPM: 1159.0
Sample B 1159.0
Sample C 1320.7
Sample D 1672.1

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1232.2
Pig sample Sample description nTPM
Liver
nTPM: 1232.3
Samples: 4

Max nTPM: 1524.5
Min nTPM: 721.9
Sample A Female 1524.5
Sample B Female 1241.3
Sample C Male 721.9
Sample D Male 1441.3

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