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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • DST
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:282.9 nTPM
GTEx:197.6 nTPM
FANTOM5:299.3 Scaled Tags Per Million
Pig:72.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

282.9
Sample id Sample description nTPM
Putamen
nTPM: 282.9
2647 Male, age 75, left hemisphere 347.8
2482 Female, age 94, left hemisphere 323.3
2489 Female, age 72, unknown 304.9
1829 Male, age 74, unknown 294.3
1838 Male, age 80, right hemisphere 255.8
1937 Female, age 91, right hemisphere 244.1
2466 Female, age 79, unknown 209.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 197.6
Samples: 254

Max nTPM: 382.9
Min nTPM: 100.9
Std nTPM: 48.7
Median nTPM: 188.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 382.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 356.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 348.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 329.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 326.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 325.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 315.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 306.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 302.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 298.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 297.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 295.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 295.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 293.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 288.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 288.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 283.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 281.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 281.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 280.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 278.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 276.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 272.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 272.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 271.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 270.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 269.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 265.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 264.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 264.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 263.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 255.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 252.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 252.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 249.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 249.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 248.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 248.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 244.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 243.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 243.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 243.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 243.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 241.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 240.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 237.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 237.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 236.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 236.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 236.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 235.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 235.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 234.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 231.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 231.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 231.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 229.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 229.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 227.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 227.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 226.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 223.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 223.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 222.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 222.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 221.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 219.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 219.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 219.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 217.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 217.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 217.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 217.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 214.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 213.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 213.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 211.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 211.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 211.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 210.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 210.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 210.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 209.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 208.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 207.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 206.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 206.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 206.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 205.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 205.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 204.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 204.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 204.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 204.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 203.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 203.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 203.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 202.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 202.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 200.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 200.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 198.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 198.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 198.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 197.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 196.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 196.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 194.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 193.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 193.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 192.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 192.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 191.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 191.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 190.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 190.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 190.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 190.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 190.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 190.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 190.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 190.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 189.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 189.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 189.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 189.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 188.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 188.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 188.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 187.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 187.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 187.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 186.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 185.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 184.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 184.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 184.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 184.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 182.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 181.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 181.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 181.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 180.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 180.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 179.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 179.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 179.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 178.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 178.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 178.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 177.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 177.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 177.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 177.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 177.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 176.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 176.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 176.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 176.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 175.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 175.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 175.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 175.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 174.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 174.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 174.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 173.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 173.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 173.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 173.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 172.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 172.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 171.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 171.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 171.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 170.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 170.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 169.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 169.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 168.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 168.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 167.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 167.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 167.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 166.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 166.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 164.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 164.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 164.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 163.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 163.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 163.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 162.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 161.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 161.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 161.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 161.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 160.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 160.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 160.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 160.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 159.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 159.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 159.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 158.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 158.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 158.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 156.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 156.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 155.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 154.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 154.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 154.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 153.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 152.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 152.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 152.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 152.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 150.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 150.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 149.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 148.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 148.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 148.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 147.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 147.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 145.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 145.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 145.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 145.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 144.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 141.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 141.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 141.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 141.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 141.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 139.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 139.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 139.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 134.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 133.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 133.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 133.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 128.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 124.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 124.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 123.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 122.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 120.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 114.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 112.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 109.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 100.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

299.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 299.3
FF:10176-103C5 60 years, female 299.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.2
Pig sample Sample description nTPM
Putamen
nTPM: 72.2
Samples: 3

Max nTPM: 80.4
Min nTPM: 59.9
Sample B Female 59.9
Sample C Male 76.4
Sample D Male 80.4

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