A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.5
nTPM
Monaco:
139.1
nTPM
Schmiedel:
178.3
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
36.5
HPA sample
nTPM
Classical monocyte nTPM: 25.2
Samples: 6
Max nTPM: 34.8
Min nTPM: 18.0
P10809_1003
30.2
P10809_1020
25.4
P10809_1039
20.6
P10809_1058
22.3
P10809_1080
34.8
P10809_1107
18.0
Intermediate monocyte nTPM: 34.9
Samples: 6
Max nTPM: 52.1
Min nTPM: 25.4
P10809_1004
37.7
P10809_1023
36.5
P10809_1042
27.5
P10809_1061
52.1
P10809_1081
30.4
P10809_1108
25.4
Non-classical monocyte nTPM: 36.5
Samples: 5
Max nTPM: 56.8
Min nTPM: 26.2
P10809_1005
38.1
P10809_1053
31.8
P10809_1072
56.8
P10809_1082
29.7
P10809_1109
26.2
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
139.1
Monaco sample
nTPM
Classical monocyte nTPM: 95.1
Samples: 4
Max nTPM: 170.9
Min nTPM: 60.6
RHH5313_R3680
60.6
RHH5221_R3593
170.9
RHH5250_R3622
66.4
RHH5279_R3651
82.5
Intermediate monocyte nTPM: 110.6
Samples: 4
Max nTPM: 197.9
Min nTPM: 74.0
RHH5314_R3681
74.0
RHH5222_R3594
197.9
RHH5251_R3623
74.5
RHH5280_R3652
95.8
Non-classical monocyte nTPM: 139.1
Samples: 4
Max nTPM: 240.8
Min nTPM: 89.7
RHH5315_R3682
96.6
RHH5223_R3595
240.8
RHH5252_R3624
89.7
RHH5281_R3653
129.3
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
178.3
Schmiedel sample id
TPM
Classical monocyte TPM: 96.4
Samples: 91
Max TPM: 279.4
Min TPM: 59.6
MONOCYTES_1
279.4
MONOCYTES_2
141.8
MONOCYTES_3
139.9
MONOCYTES_4
130.3
MONOCYTES_5
129.4
MONOCYTES_6
126.5
MONOCYTES_7
125.8
MONOCYTES_8
122.8
MONOCYTES_9
121.9
MONOCYTES_10
121.8
MONOCYTES_11
120.8
MONOCYTES_12
116.2
MONOCYTES_13
115.0
MONOCYTES_14
114.9
MONOCYTES_15
114.5
MONOCYTES_16
113.9
MONOCYTES_17
113.1
MONOCYTES_18
111.7
MONOCYTES_19
110.8
MONOCYTES_20
110.5
MONOCYTES_21
109.6
MONOCYTES_22
109.3
MONOCYTES_23
109.0
MONOCYTES_24
108.2
MONOCYTES_25
106.3
MONOCYTES_26
105.9
MONOCYTES_27
102.8
MONOCYTES_28
101.6
MONOCYTES_29
101.4
MONOCYTES_30
99.4
MONOCYTES_31
99.2
MONOCYTES_32
99.0
MONOCYTES_33
98.9
MONOCYTES_34
97.8
MONOCYTES_35
97.0
MONOCYTES_36
96.5
MONOCYTES_37
96.0
MONOCYTES_38
95.3
MONOCYTES_39
95.0
MONOCYTES_40
94.5
MONOCYTES_41
93.4
MONOCYTES_42
93.4
MONOCYTES_43
93.3
MONOCYTES_44
92.6
MONOCYTES_45
91.5
MONOCYTES_46
91.3
MONOCYTES_47
90.8
MONOCYTES_48
90.3
MONOCYTES_49
90.1
MONOCYTES_50
89.6
MONOCYTES_51
89.6
MONOCYTES_52
89.1
MONOCYTES_53
88.3
MONOCYTES_54
88.3
MONOCYTES_55
88.3
MONOCYTES_56
88.0
MONOCYTES_57
87.9
MONOCYTES_58
87.9
MONOCYTES_59
87.0
MONOCYTES_60
86.6
MONOCYTES_61
86.4
MONOCYTES_62
86.4
MONOCYTES_63
86.2
MONOCYTES_64
85.4
MONOCYTES_65
83.7
MONOCYTES_66
83.6
MONOCYTES_67
83.4
MONOCYTES_68
82.7
MONOCYTES_69
82.6
MONOCYTES_70
81.9
MONOCYTES_71
80.7
MONOCYTES_72
79.9
MONOCYTES_73
78.6
MONOCYTES_74
77.2
MONOCYTES_75
77.2
MONOCYTES_76
76.6
MONOCYTES_77
76.5
MONOCYTES_78
76.4
MONOCYTES_79
76.0
MONOCYTES_80
74.2
MONOCYTES_81
73.5
MONOCYTES_82
73.0
MONOCYTES_83
72.8
MONOCYTES_84
72.5
MONOCYTES_85
71.5
MONOCYTES_86
68.5
MONOCYTES_87
68.4
MONOCYTES_88
68.2
MONOCYTES_89
65.2
MONOCYTES_90
63.8
MONOCYTES_91
59.6
Show allShow less
Non-classical monocyte TPM: 178.3
Samples: 90
Max TPM: 270.7
Min TPM: 108.2
M2_1
270.7
M2_2
262.6
M2_3
241.0
M2_4
240.2
M2_5
227.7
M2_6
226.8
M2_7
222.9
M2_8
222.6
M2_9
217.8
M2_10
215.9
M2_11
213.5
M2_12
211.7
M2_13
208.7
M2_14
207.8
M2_15
206.4
M2_16
204.0
M2_17
202.4
M2_18
199.8
M2_19
199.3
M2_20
199.0
M2_21
197.6
M2_22
196.3
M2_23
194.5
M2_24
194.5
M2_25
194.4
M2_26
193.3
M2_27
193.3
M2_28
193.0
M2_29
191.0
M2_30
190.6
M2_31
188.9
M2_32
188.3
M2_33
188.0
M2_34
187.3
M2_35
183.0
M2_36
182.5
M2_37
181.6
M2_38
180.9
M2_39
180.5
M2_40
178.9
M2_41
178.7
M2_42
178.6
M2_43
178.6
M2_44
176.6
M2_45
175.1
M2_46
173.1
M2_47
173.0
M2_48
169.7
M2_49
169.5
M2_50
168.4
M2_51
167.1
M2_52
166.5
M2_53
164.7
M2_54
164.6
M2_55
164.4
M2_56
162.5
M2_57
162.3
M2_58
161.8
M2_59
160.9
M2_60
160.0
M2_61
159.9
M2_62
159.0
M2_63
158.8
M2_64
158.7
M2_65
158.7
M2_66
158.3
M2_67
157.7
M2_68
157.3
M2_69
156.8
M2_70
156.6
M2_71
155.9
M2_72
154.9
M2_73
154.2
M2_74
153.8
M2_75
153.0
M2_76
152.9
M2_77
152.2
M2_78
151.2
M2_79
150.5
M2_80
150.2
M2_81
149.6
M2_82
148.5
M2_83
147.2
M2_84
144.9
M2_85
144.2
M2_86
141.6
M2_87
136.7
M2_88
130.6
M2_89
126.8
M2_90
108.2
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.