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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
310.4
nTPM
HPA Brain:
276.1
nTPM
GTEx:
310.4
nTPM
FANTOM5:
138.4
Scaled Tags Per Million
Pig:
103.8
nTPM
Mouse:
798.8
nTPM
Allen mouse:
12.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
276.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 174.2
2219
Male, age 76, both hemispheres
228.1
1827
Male, age 72, unknown
198.3
2019
Male, age 18, unknown
198.1
2411
Female, age 72, unknown
196.3
2828
Female, age 72, unknown
170.8
1833
Male, age 53, unknown
166.8
1870
Female, age 42, unknown
165.3
2666
Male, age 74, left hemisphere
141.5
1830
Male, age 51, unknown
141.0
2586
Male, age 75, left hemisphere
135.8
Dorsal raphe nucleus nTPM: 205.6
2298
Female, age 72, unknown
253.6
1828
Male, age 53, unknown
237.9
2047
Male, age 72, unknown
199.5
2750
Male, age 76, both hemispheres
171.2
2016
Female, age 72, unknown
165.6
Inferior colliculus nTPM: 207.9
2097
Female, age 72, unknown
249.5
1890
Male, age 53, unknown
214.8
1848
Female, age 42, unknown
201.6
2849
Male, age 72, unknown
165.7
Median raphe nucleus nTPM: 176.3
2220
Male, age 76, midline
176.3
Periaquaductal grey, anterior nTPM: 179.3
1947
Male, age 18, unknown
203.4
1795
Male, age 51, unknown
172.9
2502
Female, age 75, unknown
161.6
Periaquaductal grey, dorsal nTPM: 162.1
1840
Male, age 53, unknown
185.6
2464
Female, age 72, unknown
155.3
1831
Male, age 72, unknown
155.1
2850
Male, age 76, both hemispheres
152.5
Periaquaductal grey, lateral nTPM: 167.4
2272
Male, age 74, both hemispheres
209.4
2053
Male, age 18, unknown
147.5
2140
Male, age 76, both hemispheres
145.3
Pretectal area nTPM: 210.7
1816
Male, age 51, unknown
262.5
1944
Female, age 72, unknown
254.7
2667
Female, age 75, unknown
251.3
1817
Female, age 42, unknown
249.4
2007
Male, age 72, unknown
245.1
2273
Male, age 74, both hemispheres
215.7
1815
Male, age 53, unknown
201.8
2224
Female, age 72, unknown
188.5
2316
Male, age 76, right hemisphere
168.7
2825
Male, age 18, unknown
158.1
2407
Male, age 75, both hemispheres
121.5
Red nucleus nTPM: 184.4
1821
Female, age 72, unknown
276.4
2725
Female, age 75, unknown
222.7
1954
Female, age 42, unknown
197.6
2503
Female, age 72, unknown
188.9
2823
Male, age 76, right hemisphere
183.1
2785
Male, age 18, unknown
177.3
2769
Male, age 72, unknown
176.7
2227
Male, age 72, unknown
175.4
1904
Male, age 53, unknown
174.9
1865
Male, age 51, unknown
169.7
2588
Male, age 74, left hemisphere
144.5
2584
Male, age 75, left hemisphere
125.4
Substantia nigra nTPM: 276.1
1916
Female, age 42, unknown
420.5
2241
Male, age 72, unknown
352.5
1851
Male, age 51, unknown
324.4
1889
Female, age 72, unknown
270.2
2409
Female, age 72, unknown
264.9
1941
Male, age 53, unknown
261.5
2699
Male, age 18, unknown
260.9
2665
Male, age 74, both hemispheres
259.2
2590
Female, age 75, unknown
203.1
2583
Male, age 75, right hemisphere
143.5
Superior colliculus nTPM: 174.2
2087
Female, age 72, unknown
234.3
1895
Male, age 76, right hemisphere
220.1
2261
Male, age 18, unknown
196.3
1796
Male, age 53, unknown
195.3
2587
Male, age 74, left hemisphere
180.8
2668
Female, age 75, unknown
164.0
1839
Male, age 51, unknown
157.9
1913
Female, age 42, unknown
134.9
1995
Male, age 72, unknown
129.8
2664
Male, age 75, both hemispheres
128.5
Ventral tegmental area nTPM: 227.3
1915
Female, age 42, unknown
295.2
2410
Female, age 72, unknown
281.2
2218
Male, age 76, both hemispheres
277.9
1942
Male, age 51, unknown
203.5
2223
Female, age 72, unknown
156.2
2021
Male, age 53, unknown
149.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
310.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 310.4
Samples: 139
Max nTPM: 681.0
Min nTPM: 118.8
Std nTPM: 111.3
Median nTPM: 307.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
681.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
665.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
650.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
624.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
558.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
553.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
549.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
541.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
484.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
477.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
474.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
468.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
456.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
445.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
441.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
440.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
434.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
423.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
422.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
420.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
419.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
410.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
406.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
404.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
393.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
388.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
379.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
379.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
379.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
376.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
369.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
367.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
363.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
361.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
361.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
360.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
359.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
355.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
355.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
355.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
355.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
353.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
352.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
352.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
352.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
351.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
349.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
343.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
343.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
339.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
331.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
330.6
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
329.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
327.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
327.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
326.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
325.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
322.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
320.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
317.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
316.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
315.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
314.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
311.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
311.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
309.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
308.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
308.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
307.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
307.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
306.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
304.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
292.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
292.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
292.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
288.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
286.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
284.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
282.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
281.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
279.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
277.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
272.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
271.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
271.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
266.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
265.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
261.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
260.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
259.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
253.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
252.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
252.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
250.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
248.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
248.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
246.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
242.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
241.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
238.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
235.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
235.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
231.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
230.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
228.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
227.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
226.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
224.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
223.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
222.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
220.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
219.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
215.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
215.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
211.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
209.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
209.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
201.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
200.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
199.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
197.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
194.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
191.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
191.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
189.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
185.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
181.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
181.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
156.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
155.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
152.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
146.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
145.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
145.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
143.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
141.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
128.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
121.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
118.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
798.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 798.8
Samples: 4
Max nTPM: 815.8
Min nTPM: 768.7
Sample A
Male
815.8
Sample B
Male
800.0
Sample C
Female
768.7
Sample D
Female
810.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.