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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
100.3
Sample id
Sample description
nTPM
Amygdala nTPM: 63.0
2517
Female, age 94, left hemisphere
82.9
1987
Female, age 91, left hemisphere
75.4
2814
Male, age 76, right hemisphere
66.0
2514
Male, age 75, right hemisphere
62.2
2695
Female, age 67, right hemisphere
28.6
Basal amygdala nTPM: 100.3
2827
Female, age 67, right hemisphere
125.0
2685
Female, age 94, left hemisphere
119.7
2243
Female, age 91, right hemisphere
119.3
2110
Male, age 80, left hemisphere
87.7
2609
Male, age 75, right hemisphere
78.5
1955
Male, age 76, both hemispheres
71.7
Central amygdala nTPM: 85.1
2826
Female, age 94, left hemisphere
126.6
2239
Male, age 80, left hemisphere
89.5
2515
Male, age 75, right hemisphere
80.0
2701
Female, age 91, right hemisphere
72.9
1905
Male, age 76, both hemispheres
56.5
Corticomedial amygdala nTPM: 93.0
2535
Female, age 67, right hemisphere
137.4
2242
Female, age 91, right hemisphere
107.3
2829
Male, age 80, left hemisphere
104.3
2429
Female, age 94, left hemisphere
85.4
2428
Male, age 75, right hemisphere
67.2
2240
Male, age 76, both hemispheres
56.3
Lateral amygdala nTPM: 83.5
2534
Female, age 94, left hemisphere
123.4
2255
Female, age 91, right hemisphere
95.3
2256
Male, age 80, left hemisphere
91.2
2830
Female, age 67, right hemisphere
78.7
1883
Male, age 76, both hemispheres
65.4
2516
Male, age 75, right hemisphere
47.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
87.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 87.8
Samples: 181
Max nTPM: 227.4
Min nTPM: 11.5
Std nTPM: 38.1
Median nTPM: 84.8
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
227.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
193.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
171.9
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
171.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
170.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
163.3
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
162.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
161.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
158.0
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
154.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
151.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
150.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
150.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
147.6
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
147.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
144.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
144.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
143.4
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
140.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
140.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
137.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
136.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
135.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
132.6
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
131.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
129.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
128.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
127.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
127.7
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
127.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
126.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
123.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
123.5
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
115.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
115.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
114.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
114.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
113.9
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
112.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
112.1
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
111.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
111.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
111.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
111.0
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
110.9
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
110.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
110.5
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
110.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
109.2
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
108.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
108.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
106.9
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
103.6
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
103.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
102.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
102.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
102.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
101.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
101.3
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
100.4
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
98.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
98.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
98.1
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
97.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
97.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
97.2
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
96.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
96.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
95.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
95.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
95.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
94.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
94.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
94.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
93.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
93.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
93.0
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
92.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
92.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
92.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
90.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
90.4
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
90.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
89.0
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
88.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
88.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
87.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
86.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
86.3
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
85.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
84.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
84.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
84.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
84.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
84.5
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
84.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
84.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
84.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
84.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
83.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
83.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
83.6
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
81.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
81.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
79.7
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
79.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
79.1
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
78.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
78.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
78.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
76.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
76.2
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
73.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
73.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
73.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
72.9
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
72.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
71.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
71.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
71.4
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
70.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
70.7
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
70.2
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
69.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
68.1
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
67.8
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
67.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
64.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
64.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
64.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
63.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
62.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
61.2
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
59.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
59.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
58.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
56.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
56.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
56.4
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
56.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
55.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
54.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
54.6
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
54.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
54.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
52.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
51.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
51.1
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
51.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
50.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
48.9
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
48.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
47.7
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
46.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
46.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
45.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
43.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
42.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
41.7
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
40.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
39.4
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
39.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
38.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
38.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
38.5
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
38.0
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
34.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
33.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
33.0
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
32.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
29.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
29.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
28.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
25.0
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
22.1
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
17.0
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
14.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
11.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 85.9
Samples: 4
Max nTPM: 107.9
Min nTPM: 75.6
Sample A
Male
81.8
Sample B
Male
78.3
Sample C
Female
107.9
Sample D
Female
75.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.