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  • SLFN13
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:5.3 nTPM
Monaco:111.7 nTPM
Schmiedel:211.1 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

5.3
HPA sample nTPM
NK-cell
nTPM: 5.3
Samples: 6

Max nTPM: 9.0
Min nTPM: 1.6
P10809_1013 9.0
P10809_1033 2.9
P10809_1052 3.9
P10809_1071 1.6
P10809_1093 7.9
P10809_1103 6.7

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

111.7
Monaco sample nTPM
NK-cell
nTPM: 111.7
Samples: 4

Max nTPM: 127.2
Min nTPM: 95.1
RHH5316_R3683 95.1
RHH5224_R3596 111.0
RHH5253_R3625 127.2
RHH5282_R3654 113.6

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

211.1
Schmiedel sample id TPM
NK-cell
TPM: 211.1
Samples: 90

Max TPM: 342.2
Min TPM: 136.5
NK_1 342.2
NK_2 310.8
NK_3 285.4
NK_4 279.5
NK_5 277.1
NK_6 276.4
NK_7 271.1
NK_8 268.5
NK_9 262.3
NK_10 258.2
NK_11 256.3
NK_12 255.1
NK_13 253.4
NK_14 253.3
NK_15 252.5
NK_16 252.0
NK_17 250.0
NK_18 248.7
NK_19 246.4
NK_20 246.2
NK_21 244.6
NK_22 244.1
NK_23 242.8
NK_24 237.1
NK_25 234.4
NK_26 233.4
NK_27 231.8
NK_28 229.9
NK_29 229.7
NK_30 227.3
NK_31 225.3
NK_32 224.0
NK_33 222.7
NK_34 221.3
NK_35 220.6
NK_36 219.8
NK_37 219.5
NK_38 216.6
NK_39 214.4
NK_40 213.2
NK_41 212.6
NK_42 211.9
NK_43 211.5
NK_44 210.9
NK_45 208.5
NK_46 206.0
NK_47 204.6
NK_48 204.5
NK_49 203.1
NK_50 203.1
NK_51 202.1
NK_52 200.6
NK_53 199.5
NK_54 197.7
NK_55 197.6
NK_56 195.2
NK_57 193.5
NK_58 192.6
NK_59 192.4
NK_60 191.7
NK_61 191.0
NK_62 190.2
NK_63 190.0
NK_64 189.6
NK_65 188.0
NK_66 187.7
NK_67 184.8
NK_68 182.6
NK_69 179.9
NK_70 179.7
NK_71 178.9
NK_72 176.9
NK_73 175.7
NK_74 173.7
NK_75 173.2
NK_76 172.0
NK_77 168.6
NK_78 168.4
NK_79 163.8
NK_80 159.1
NK_81 157.5
NK_82 156.8
NK_83 155.3
NK_84 152.9
NK_85 152.2
NK_86 152.0
NK_87 147.9
NK_88 138.8
NK_89 137.6
NK_90 136.5
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