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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:240.8 nTPM
HPA Brain:105.0 nTPM
GTEx:240.8 nTPM
Pig:95.1 nTPM
Mouse:405.6 nTPM
Allen mouse:18.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 57.2
2226 Male, age 75, left hemisphere 68.8
1961 Female, age 42, unknown 45.6
Dorsomedial nucleus
nTPM: 60.2
1989 Male, age 62, unknown 69.2
2041 Female, age 72, unknown 59.6
2017 Female, age 42, unknown 51.9
Lateral hypothalamic area
nTPM: 70.4
2271 Male, age 75, both hemispheres 71.7
2228 Male, age 66, unknown 70.9
1791 Male, age 80, right hemisphere 70.5
2412 Male, age 62, unknown 68.4
Mammillary body
nTPM: 105.0
1923 Female, age 72, unknown 150.0
1948 Female, age 72, unknown 104.2
1834 Female, age 42, unknown 91.8
1945 Male, age 80, right hemisphere 90.0
2413 Male, age 66, unknown 88.9
Paraventricular nucleus
nTPM: 71.7
2700 Male, age 62, unknown 71.7
Preoptic area
nTPM: 70.5
1861 Female, age 42, unknown 74.4
2414 Female, age 72, unknown 69.1
1907 Male, age 80, right hemisphere 68.1
Supraoptic nucleus
nTPM: 84.5
1894 Female, age 72, unknown 106.0
2835 Female, age 72, unknown 80.2
2043 Male, age 62, unknown 67.2
Ventromedial nucleus
nTPM: 56.2
1982 Female, age 72, unknown 60.2
1822 Female, age 42, unknown 52.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

240.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 240.8
Samples: 257

Max nTPM: 682.1
Min nTPM: 72.0
Std nTPM: 79.3
Median nTPM: 227.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 682.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 575.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 550.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 550.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 478.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 457.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 435.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 419.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 414.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 406.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 401.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 397.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 392.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 386.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 378.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 378.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 375.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 358.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 356.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 355.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 353.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 351.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 349.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 347.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 337.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 337.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 332.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 329.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 323.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 322.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 319.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 311.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 311.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 311.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 309.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 308.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 308.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 307.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 305.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 302.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 299.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 299.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 298.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 293.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 292.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 290.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 290.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 287.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 287.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 287.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 287.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 286.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 286.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 285.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 285.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 284.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 283.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 281.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 281.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 279.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 277.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 274.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 273.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 271.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 270.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 270.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 269.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 269.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 269.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 268.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 266.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 264.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 264.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 264.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 263.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 263.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 263.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 261.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 260.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 257.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 256.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 256.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 256.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 255.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 254.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 254.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 254.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 252.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 252.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 249.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 247.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 247.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 247.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 247.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 247.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 246.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 243.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 243.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 243.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 243.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 242.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 242.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 242.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 241.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 241.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 240.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 240.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 238.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 237.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 237.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 236.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 236.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 236.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 235.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 234.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 234.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 234.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 234.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 233.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 232.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 231.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 230.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 230.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 229.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 229.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 229.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 228.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 228.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 227.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 226.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 226.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 224.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 223.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 223.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 222.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 222.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 222.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 221.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 221.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 220.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 220.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 220.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 219.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 218.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 217.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 216.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 215.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 214.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 213.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 213.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 213.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 212.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 211.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 210.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 209.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 209.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 208.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 208.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 207.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 206.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 206.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 205.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 205.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 204.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 204.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 201.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 201.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 200.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 199.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 199.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 198.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 197.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 196.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 196.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 196.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 195.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 195.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 195.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 195.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 194.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 194.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 194.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 193.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 193.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 193.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 192.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 192.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 191.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 190.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 189.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 188.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 188.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 187.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 187.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 187.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 187.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 186.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 186.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 183.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 183.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 181.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 181.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 181.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 180.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 180.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 180.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 179.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 179.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 179.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 179.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 178.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 177.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 177.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 177.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 176.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 174.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 174.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 172.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 172.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 171.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 171.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 170.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 169.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 169.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 169.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 169.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 168.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 167.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 166.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 165.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 165.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 165.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 164.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 163.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 163.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 162.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 161.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 158.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 157.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 157.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 156.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 155.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 152.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 152.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 152.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 151.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 150.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 146.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 139.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 138.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 137.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 135.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 131.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 130.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 120.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 112.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 72.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 95.1
Samples: 4

Max nTPM: 119.4
Min nTPM: 83.4
Sample A Female 119.4
Sample B Female 93.9
Sample C Male 83.4
Sample D Male 83.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

405.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 405.6
Samples: 4

Max nTPM: 423.4
Min nTPM: 387.0
Sample A Male 387.0
Sample B Male 417.4
Sample C Female 423.4
Sample D Female 394.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.6
293241 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 18.6
323595 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 9.3

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