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RPL30
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  • RPL30
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
Brain methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1583.8 nTPM
HPA Brain:456.4 nTPM
GTEx:1583.8 nTPM
FANTOM5:322.7 Scaled Tags Per Million
Pig:89.1 nTPM
Mouse:409.2 nTPM
Allen mouse:4.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

456.4
Sample id Sample description nTPM
Amygdala
nTPM: 456.4
2695 Female, age 67, right hemisphere 638.9
2514 Male, age 75, right hemisphere 449.9
2814 Male, age 76, right hemisphere 434.3
1987 Female, age 91, left hemisphere 389.3
2517 Female, age 94, left hemisphere 369.7
Basal amygdala
nTPM: 367.1
2827 Female, age 67, right hemisphere 547.9
2609 Male, age 75, right hemisphere 388.3
2685 Female, age 94, left hemisphere 336.1
2110 Male, age 80, left hemisphere 335.7
1955 Male, age 76, both hemispheres 328.5
2243 Female, age 91, right hemisphere 266.1
Central amygdala
nTPM: 397.8
2826 Female, age 94, left hemisphere 661.4
2515 Male, age 75, right hemisphere 382.4
1905 Male, age 76, both hemispheres 335.0
2239 Male, age 80, left hemisphere 316.0
2701 Female, age 91, right hemisphere 294.4
Corticomedial amygdala
nTPM: 331.0
2428 Male, age 75, right hemisphere 379.0
2535 Female, age 67, right hemisphere 369.7
2240 Male, age 76, both hemispheres 328.6
2429 Female, age 94, left hemisphere 316.2
2829 Male, age 80, left hemisphere 311.4
2242 Female, age 91, right hemisphere 281.2
Lateral amygdala
nTPM: 424.8
2830 Female, age 67, right hemisphere 664.2
2516 Male, age 75, right hemisphere 530.7
2534 Female, age 94, left hemisphere 455.9
2256 Male, age 80, left hemisphere 334.6
1883 Male, age 76, both hemispheres 317.4
2255 Female, age 91, right hemisphere 246.0

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1583.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1583.8
Samples: 181

Max nTPM: 5046.8
Min nTPM: 676.8
Std nTPM: 626.5
Median nTPM: 1450.3
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 5046.8
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 4530.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 3644.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 3616.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3486.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 3048.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2944.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2870.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 2720.1
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 2528.3
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 2496.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2433.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 2427.5
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 2336.9
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 2321.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 2273.0
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 2227.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 2222.7
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 2217.8
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 2168.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2162.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 2158.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 2154.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 2140.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 2138.1
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 2131.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 2055.6
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 2021.7
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 2021.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 2013.8
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 2012.3
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 2004.8
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 1995.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1980.2
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 1975.7
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1972.7
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 1970.6
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 1962.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1948.0
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1918.0
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 1890.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1886.4
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 1842.0
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1836.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1832.2
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 1830.3
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 1816.0
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 1810.9
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 1803.6
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1797.7
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 1780.0
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1763.4
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 1761.1
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1752.7
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1751.3
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1730.9
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 1725.1
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1718.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1712.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1710.9
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 1706.1
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1704.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1694.3
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 1681.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1670.4
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1652.7
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 1628.3
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1620.9
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1619.1
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 1600.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1585.4
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 1571.3
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 1570.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1569.1
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1567.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1563.1
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1552.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1552.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1551.7
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1537.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1536.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1523.3
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1518.3
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 1502.0
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1498.4
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 1498.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1469.0
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 1467.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1459.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1454.6
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1450.3
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1438.2
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 1436.9
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1436.5
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1435.7
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 1430.0
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1417.3
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 1412.1
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1408.4
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1408.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1404.8
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 1398.3
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1389.0
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1388.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1381.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1359.9
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1357.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1350.3
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1348.6
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 1333.6
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1331.6
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 1319.9
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1318.8
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 1317.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1305.2
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1304.7
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1295.5
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 1295.5
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 1286.0
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 1285.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1277.3
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1271.7
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1260.7
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1257.5
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 1256.4
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 1243.8
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1243.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1229.3
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 1228.4
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 1227.5
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1210.7
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 1208.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1198.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1193.8
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1180.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1169.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1166.0
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 1164.5
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1156.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1134.8
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 1129.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1125.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1123.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 1120.9
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1120.3
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1115.4
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1113.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 1098.2
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 1085.7
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 1076.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1076.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1071.0
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1070.9
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 1069.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1041.4
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 1030.8
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1026.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 1024.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 1022.2
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1021.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 1016.6
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 1012.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 1010.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 991.8
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 980.8
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 973.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 966.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 939.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 938.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 921.6
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 882.8
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 877.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 858.5
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 849.7
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 846.8
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 840.9
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 819.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 764.8
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 746.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 685.4
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 676.8
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

322.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 322.7
FF:10151-102I7 76 years, female 322.7

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.1
Pig sample Sample description nTPM
Amygdala
nTPM: 89.1
Samples: 4

Max nTPM: 111.7
Min nTPM: 53.8
Sample A Female 109.6
Sample B Female 111.7
Sample C Male 81.2
Sample D Male 53.8

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

409.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 409.2
Samples: 4

Max nTPM: 439.8
Min nTPM: 386.2
Sample A Male 386.2
Sample B Male 404.1
Sample C Female 439.8
Sample D Female 406.7

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.8
100143515 Antisense, RP_110407_01_E05, Mouse strain C57BL/6J (56 days, male) 4.8

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