HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:1330.7 nTPM
HPA Brain:365.4 nTPM
GTEx:1330.7 nTPM
FANTOM5:302.8 Scaled Tags Per Million
Pig:106.2 nTPM
Mouse:445.0 nTPM
Allen mouse:6.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002651
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 365.4
Sample id Sample description nTPM
Hippocampus
nTPM: 350.4
2529 Female, age 94, left hemisphere 392.5
1898 Male, age 80, left hemisphere 380.3
2621 Female, age 67, right hemisphere 360.0
1911 Female, age 85, right hemisphere 354.9
1855 Male, age 76, left hemisphere 343.3
2148 Female, age 91, left hemisphere 271.5
Dentate gyrus
nTPM: 336.6
2530 Female, age 94, left hemisphere 433.0
2010 Male, age 76, both hemispheres 402.8
2246 Female, age 85, both hemispheres 347.5
2531 Female, age 67, both hemispheres 319.3
1927 Female, age 91, both hemispheres 262.0
2528 Male, age 74, both hemispheres 254.7
Entorhinal gyrus
nTPM: 320.4
2686 Male, age 75, right hemisphere 415.7
2117 Female, age 91, right hemisphere 345.3
1787 Male, age 76, left hemisphere 335.1
2764 Male, age 80, right hemisphere 299.7
1938 Female, age 85, left hemisphere 295.6
2613 Female, age 94, left hemisphere 230.9
Hippocampus, CA1
nTPM: 305.8
2045 Male, age 76, both hemispheres 322.3
2527 Male, age 74, both hemispheres 317.4
2082 Female, age 91, right hemisphere 314.0
1873 Female, age 85, both hemispheres 303.0
2749 Male, age 80, left hemisphere 272.5
Hippocampus, CA2
nTPM: 321.0
2437 Female, age 94, left hemisphere 353.0
1940 Female, age 85, left hemisphere 339.2
1892 Male, age 76, both hemispheres 324.2
1963 Male, age 80, left hemisphere 321.9
2113 Female, age 91, right hemisphere 301.2
2249 Male, age 74, both hemispheres 286.6
Hippocampus, CA3
nTPM: 278.3
1891 Female, age 85, both hemispheres 375.9
1867 Male, age 76, both hemispheres 354.2
2861 Female, age 67, both hemispheres 259.7
2436 Male, age 74, both hemispheres 257.2
2137 Male, age 80, left hemisphere 246.5
2620 Female, age 94, left hemisphere 176.2
Parahippocampal cortex
nTPM: 300.2
2018 Male, age 76, both hemispheres 442.8
2692 Male, age 74, both hemispheres 319.8
2532 Female, age 72, left hemisphere 314.0
1850 Male, age 80, both hemispheres 307.2
2245 Female, age 91, both hemispheres 304.0
1990 Female, age 91, right hemisphere 296.7
1933 Female, age 85, both hemispheres 293.5
2250 Female, age 67, right hemisphere 280.9
2622 Female, age 67, right hemisphere 228.3
2693 Female, age 94, both hemispheres 215.2
Perirhinal gyrus
nTPM: 300.6
1841 Female, age 85, right hemisphere 324.4
1847 Female, age 91, left hemisphere 314.4
1794 Male, age 80, right hemisphere 305.2
2848 Male, age 76, right hemisphere 294.9
2521 Female, age 94, right hemisphere 264.1
Subiculum
nTPM: 365.4
2042 Male, age 76, both hemispheres 459.5
2438 Female, age 94, left hemisphere 452.0
1977 Female, age 85, both hemispheres 362.5
1901 Male, age 80, both hemispheres 347.5
2619 Male, age 74, both hemispheres 288.9
2729 Female, age 91, right hemisphere 282.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1330.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1330.7
Samples: 255

Max nTPM: 4050.7
Min nTPM: 468.8
Std nTPM: 502.4
Median nTPM: 1197.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 4050.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3540.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2873.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2782.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2761.6
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 2704.6
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2639.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2506.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2457.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2436.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2370.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 302.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 302.8
FF:10153-102I9 76 years, female 322.2
FF:10169-103B7 60 years, female 283.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 106.2
Pig sample Sample description nTPM
Subiculum
nTPM: 88.0
Samples: 4

Max nTPM: 139.3
Min nTPM: 60.8
Sample A Female 139.3
Sample B Female 79.9
Sample C Male 60.8
Sample D Male 71.9
Dorsal hippocampus
nTPM: 106.2
Samples: 4

Max nTPM: 159.8
Min nTPM: 69.5
Sample A Female 159.8
Sample B Female 91.3
Sample C Male 104.1
Sample D Male 69.5
Entorhinal cortex
nTPM: 93.8
Samples: 4

Max nTPM: 125.6
Min nTPM: 64.6
Sample A Female 80.9
Sample B Female 125.6
Sample C Male 104.2
Sample D Male 64.6
Ventral hippocampus
nTPM: 90.5
Samples: 4

Max nTPM: 108.1
Min nTPM: 80.1
Sample A Female 108.1
Sample B Female 81.1
Sample C Male 92.7
Sample D Male 80.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 445.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 414.8
Samples: 4

Max nTPM: 446.6
Min nTPM: 386.7
Sample A Male 421.3
Sample B Male 404.6
Sample C Female 446.6
Sample D Female 386.7
Hippocampal formation
nTPM: 445.0
Samples: 4

Max nTPM: 513.2
Min nTPM: 364.8
Sample A Male 513.2
Sample B Male 440.8
Sample C Female 461.0
Sample D Female 364.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
100143515 Antisense, RP_110407_01_E05, Mouse strain C57BL/6J (56 days, male) 6.7

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