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RPL30
HPA
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  • RPL30
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
Tissue methods
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1934.6 nTPM
HPA:1147.1 nTPM
GTEx:1934.6 nTPM
FANTOM5:638.4 Scaled Tags Per Million
SMALL INTESTINE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA002651
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1147.1
overview
Male, age 65
Small intestine sample 232
nTPM: 1416.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1129.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1021.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1020.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1934.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1934.6
Samples: 207

Max nTPM: 4696.7
Min nTPM: 961.1
Std nTPM: 662.6
Median nTPM: 1785.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 4696.7
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 4344.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 4189.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 4170.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3681.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3632.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 3590.6
GTEX-1RQED-2826-SM-HLJQK 60-69 years, male 3573.6
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 3495.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 3347.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 3317.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 3213.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 3196.2
GTEX-183FY-1626-SM-793D8 20-29 years, male 3106.4
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 3050.4
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2943.2
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2938.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2880.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2845.5
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2816.8
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2757.9
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2707.7
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2687.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2682.5
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2626.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2598.2
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2571.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2569.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2524.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2522.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2518.4
GTEX-1M5QR-2226-SM-HLJRV 40-49 years, male 2517.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2511.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2475.1
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2464.5
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2435.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2422.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2420.9
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 2408.6
GTEX-1HKZK-2226-SM-GA91V 40-49 years, male 2404.0
GTEX-W5X1-1926-SM-GOQYX 40-49 years, female 2322.0
GTEX-1PFEY-1326-SM-HK791 30-39 years, male 2315.2
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 2306.9
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2287.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2286.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2280.4
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2275.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2240.6
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2239.9
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2223.6
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2210.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2202.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2201.6
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2197.4
GTEX-1HSGN-2126-SM-GA8ZB 40-49 years, female 2187.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 2187.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 2181.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 2168.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2155.1
GTEX-1MCYP-1626-SM-HLJQ5 20-29 years, female 2146.8
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2137.0
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 2135.6
GTEX-1C475-1426-SM-793CH 40-49 years, female 2132.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 2124.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2123.1
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 2104.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 2102.8
GTEX-WHPG-1826-SM-GNTAH 50-59 years, male 2101.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 2099.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2089.5
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 2076.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 2069.2
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 2065.7
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2057.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2053.0
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2027.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2015.6
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 2010.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 2007.5
GTEX-XPT6-1026-SM-GOQYN 20-29 years, male 2001.9
GTEX-ZPU1-1826-SM-GNTB3 40-49 years, male 1982.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1981.4
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1978.7
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1976.5
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1965.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1965.1
GTEX-1192X-2526-SM-59868 50-59 years, male 1940.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1939.6
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1930.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1928.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1923.4
GTEX-1HCUA-1726-SM-GA8Z2 50-59 years, female 1918.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1900.7
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1899.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1868.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1864.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1861.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1841.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1827.7
GTEX-13X6H-1826-SM-5O9D1 50-59 years, female 1815.5
GTEX-ZV7C-1426-SM-GNTB8 50-59 years, male 1807.5
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1793.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1789.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1785.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1772.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1770.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1770.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1760.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1757.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1743.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1734.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1734.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1722.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1721.1
GTEX-U8XE-2226-SM-HAUZQ 30-39 years, male 1711.0
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1705.0
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1704.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1700.4
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1699.6
GTEX-YJ8A-2126-SM-GQ1C7 20-29 years, male 1694.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1694.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1687.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1646.5
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1644.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1642.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1636.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1619.9
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1614.0
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1602.4
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1600.4
GTEX-178AV-1226-SM-GOR11 40-49 years, male 1599.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1595.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1589.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1586.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1584.6
GTEX-1NHNU-2526-SM-HK79M 50-59 years, male 1582.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1577.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1574.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1568.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1565.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1559.7
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1556.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1552.2
GTEX-X4LF-1326-SM-HLJSD 50-59 years, male 1551.4
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1547.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1538.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1532.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1522.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1521.1
GTEX-YB5K-1126-SM-H6Q6O 40-49 years, female 1514.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1510.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1509.7
GTEX-1MA7W-0726-SM-HLJQU 20-29 years, female 1504.1
GTEX-144GM-1026-SM-5O9AZ 20-29 years, male 1501.9
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1497.6
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1486.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1474.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1468.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1462.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1435.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1435.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1431.2
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1427.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1421.6
GTEX-1S831-1526-SM-HLJQS 20-29 years, male 1413.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1407.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1407.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1405.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1402.9
GTEX-X3Y1-1526-SM-H6Q6X 40-49 years, male 1402.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1399.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1394.4
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1382.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1380.2
GTEX-ZT9X-1026-SM-HLJS2 40-49 years, male 1370.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1351.8
GTEX-1HBPN-1926-SM-GA91H 50-59 years, male 1341.8
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1339.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1339.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1326.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1320.4
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1308.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1286.3
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1260.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1243.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 1235.7
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1233.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1220.4
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1215.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1210.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1209.2
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1208.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1196.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1182.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1159.1
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1143.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1127.1
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1106.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1081.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1061.6
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1040.9
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1031.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1029.6
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1006.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 978.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 975.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 961.1
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

638.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 638.4
FF:10024-101D6 15,40,85 years, mixed 638.4

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